RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CEP70Q8NHQ1 597 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 FAM45AQ8TCE6 357 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 UBXN10Q96LJ8 280 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 NR1H4Q96RI1 486 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 GSTO2Q9H4Y5 243 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 REV3LO60673 3130 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 CCDC162PA2VCL2 907 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 TCAF2A6NFQ2 919 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 F5H5T6 163 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 TLR5O60602 858 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SNUPNO95149 360 aaKnown RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 WISP3O95389 354 aaPredicted RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 MT-CO1P00395 513 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 MAPKAPK2P49137 400 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SLC11A1P49279 550 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 MRPS22P82650 360 aaKnown RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 DUSP4Q13115 394 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 FLOT2Q14254 428 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 OR52E8Q6IFG1 317 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 ZNF549Q6P9A3 640 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 GALNT7Q86SF2 657 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SLC22A9Q8IVM8 553 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SNX31Q8N9S9 440 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 SPPL2BQ8TCT7 592 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 PTERQ96BW5 349 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 FEM1CQ96JP0 617 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 FAR2Q96K12 515 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 DDX50Q9BQ39 737 aaKnown RBP12.92□□□□□ -0.34
CPSF6-201ENST00000266679 EFCAB1Q9HAE3 211 aa12.92□□□□□ -0.34
CPSF6-201ENST00000266679 CD3EAPO15446 510 aaKnown RBP12.91□□□□□ -0.34
CPSF6-201ENST00000266679 GLP2RO95838 553 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 FGF1P05230 155 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 LYNP07948 512 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 ZCCHC18P0CG32 403 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 PRSS56P0CW18 603 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 FGFR3P22607 806 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 KCNC1P48547 511 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 CLEC6AQ6EIG7 209 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 BHLHE22Q8NFJ8 381 aaPredicted RBP12.91□□□□□ -0.34
CPSF6-201ENST00000266679 OR7D4Q8NG98 312 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 MEAF6Q9HAF1 191 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 PDFQ9HBH1 243 aa12.91□□□□□ -0.34
CPSF6-201ENST00000266679 A0A0D9SEW6 157 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SLC38A8A6NNN8 435 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 UBFD1O14562 309 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 RPP40O75818 363 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SUPT7LO94864 414 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 HLA-DPA1P20036 260 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 FDXRP22570 491 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SLC6A4P31645 630 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 YBEYP58557 167 aaPredicted RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SQLEQ14534 574 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 FUT10Q6P4F1 479 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ANKRD33Q7Z3H0 272 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PHC3Q8NDX5 983 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 HMGCLL1Q8TB92 370 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 TRPC7Q9HCX4 862 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 VPS28Q9UK41 221 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PSMD13Q9UNM6 376 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PCDHB7Q9Y5E2 793 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 GBF1Q92538 1859 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SPTBN5Q9NRC6 3674 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 CCDC189A1A4V9 331 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SMIM24O75264 130 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 TCN1P20061 433 aaPredicted RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ME2P23368 584 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 MS4A2Q01362 244 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ACVR1Q04771 509 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 RING1Q06587 406 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 GPR17Q13304 367 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 FASTKQ14296 549 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 RFTN1Q14699 578 aaPredicted RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 AGKQ53H12 422 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ZNF678Q5SXM1 525 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 IL31Q6EBC2 164 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 TAS1R1Q7RTX1 841 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 ISCA2Q86U28 154 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 PCDH20Q8N6Y1 951 aaKnown RBP12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SPATA17Q96L03 361 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SPON2Q9BUD6 331 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 DTNAQ9Y4J8 743 aa12.9□□□□□ -0.34
CPSF6-201ENST00000266679 TRAF6Q9Y4K3 522 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms