RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-201ENST00000266546 GCATO75600 419 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 METTL18O95568 372 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 CKMT2P17540 419 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 CDH15P55291 814 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 KCNJ11Q14654 390 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 NR6A1Q15406 480 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 UBXN11Q5T124 520 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ZBTB8BQ8NAP8 495 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 FNDC5Q8NAU1 212 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 FBXO32Q969P5 355 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 PKP2Q99959 881 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SH3GL1Q99961 368 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ALG9Q9H6U8 611 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 HMGXB4Q9UGU5 601 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 DYTNA2CJ06 578 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 C2CD4BA6NLJ0 364 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 CLDN5O00501 218 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SYNCRIPO60506 623 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 MED26O95402 600 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SEC24AO95486 1093 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TOP3BO95985 862 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 CCT8P50990 548 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC25A52Q3SY17 297 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 PPM1LQ5SGD2 360 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM198Q66K66 360 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ANKS6Q68DC2 871 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 MIB1Q86YT6 1006 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 PCDH19Q8TAB3 1148 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 HM13Q8TCT9 377 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM40Q8WWA1 233 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 S100ZQ8WXG8 99 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ASB2Q96Q27 587 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 OR52B2Q96RD2 323 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ADI1Q9BV57 179 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 PCDHAC1Q9H158 963 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 RGS18Q9NS28 235 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TBC1D13Q9NVG8 400 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 AFF4Q9UHB7 1163 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 EIF3LQ9Y262 564 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 CHRNA1P02708 482 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 URODP06132 367 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ALOX12P18054 663 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 BRCC3P46736 316 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ZBTB6Q15916 424 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 IL23RQ5VWK5 629 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SPPL2CQ8IUH8 684 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 NPAS4Q8IUM7 802 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 RBM12BQ8IXT5 1001 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 MPP5Q8N3R9 675 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 FBXO39Q8N4B4 442 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM199Q8N511 208 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ATG16L2Q8NAA4 619 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TBL1YQ9BQ87 522 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ELAC1Q9H777 363 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC17A6Q9P2U8 582 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 POLG2Q9UHN1 485 aa11.55□□□□□ -0.56
CLSTN3-201ENST00000266546 GLP2RO95838 553 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CCR1P32246 355 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 SOX6P35712 828 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ADAM17P78536 824 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CSTF3Q12996 717 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC39A12Q504Y0 691 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 LDLRAP1Q5SW96 308 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CERCAMQ5T4B2 595 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 OFCC1Q8IZS5 231 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 SUSD3Q96L08 255 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 WDR12Q9GZL7 423 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF556Q9HAH1 456 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 LATS2Q9NRM7 1088 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 TRMT6Q9UJA5 497 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PHF24Q9UPV7 400 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PKP3Q9Y446 797 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 RAD54BQ9Y620 910 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM159BA6NKW6 160 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 E7ESA3 106 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 MDM4O15151 490 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF682O95780 498 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CHRNGP07510 517 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 HGFP14210 728 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 S100A1P23297 94 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PRKCHP24723 683 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 TLR1Q15399 786 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PDCD4Q53EL6 469 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 UNC5BQ8IZJ1 945 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms