RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 AIREO43918 545 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 COL6A2P12110 1019 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 LY6KQ17RY6 165 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 DCAF4L1Q3SXM0 396 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 PROSER1Q86XN7 944 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 RAB43Q86YS6 212 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 ARMC8Q8IUR7 673 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 CHCHD6Q9BRQ6 235 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 KRT84Q9NSB2 600 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 EXD2Q9NVH0 621 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 IKZF3Q9UKT9 509 aa15.1■□□□□ 0.01
CASC3-201ENST00000264645 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 SLC22A2O15244 555 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 XPAP23025 273 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 TYSND1Q2T9J0 566 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 RFX4Q33E94 735 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 LDB1Q86U70 411 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 UBE2J2Q8N2K1 259 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 SMG8Q8ND04 991 aaKnown RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 NDRG1Q92597 394 aaKnown RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 ROPN1LQ96C74 230 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 RPRD1AQ96P16 312 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 GPR63Q9BZJ6 419 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 ULBP1Q9BZM6 244 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 CRNNQ9UBG3 495 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 CEPT1Q9Y6K0 416 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 ATRNL1Q5VV63 1379 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 ZNF99A8MXY4 864 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 RPL10P27635 214 aaKnown RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 S100A3P33764 101 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 BMXP51813 675 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 CNTN2Q02246 1040 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 OLIG2Q13516 323 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 ZNF621Q6ZSS3 439 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 TRPV3Q8NET8 790 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 TWIST2Q8WVJ9 160 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 KCTD15Q96SI1 283 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 TEX12Q9BXU0 123 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 NENFQ9UMX5 172 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 ZNF197O14709 1029 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 GPR158Q5T848 1215 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 GPR180Q86V85 440 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 MIB1Q86YT6 1006 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 PACRGLQ8N7B6 248 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 SLC29A1Q99808 456 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 MIR1-1HGQ9H1L0 117 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 CCNB1IP1Q9NPC3 277 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 FMN2Q9NZ56 1722 aa15.09■□□□□ 0.01
CASC3-201ENST00000264645 COL1A1P02452 1464 aaPredicted RBP15.09■□□□□ 0.01
CASC3-201ENST00000264645 FFAR3O14843 346 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 AREL1O15033 823 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 GPR42O15529 346 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 ADORA2AP29274 412 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 SOAT1P35610 550 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 QPRTQ15274 297 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 PAN2Q504Q3 1202 aaKnown RBP15.08■□□□□ 0.01
CASC3-201ENST00000264645 PRR23BQ6ZRT6 265 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 RPS27LQ71UM5 84 aaKnown RBP15.08■□□□□ 0.01
CASC3-201ENST00000264645 SLC26A9Q7LBE3 791 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 OTOP3Q7RTS5 596 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 SLC51AQ86UW1 340 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 FAM35AQ86V20 835 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 SPATA2LQ8IUW3 424 aaPredicted RBP15.08■□□□□ 0.01
CASC3-201ENST00000264645 TCAIMQ8N3R3 496 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 SLC47A1Q96FL8 570 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 ZNF512Q96ME7 567 aaPredicted RBP15.08■□□□□ 0.01
CASC3-201ENST00000264645 GPBP1L1Q9HC44 474 aaPredicted RBP15.08■□□□□ 0.01
CASC3-201ENST00000264645 AMBNQ9NP70 447 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0.01
CASC3-201ENST00000264645 C2orf81A6NN90 581 aa15.08■□□□□ 0
CASC3-201ENST00000264645 ARPC2O15144 300 aa15.08■□□□□ 0
CASC3-201ENST00000264645 DLX3O60479 287 aa15.08■□□□□ 0
CASC3-201ENST00000264645 BMP10O95393 424 aa15.08■□□□□ 0
CASC3-201ENST00000264645 AP2A1O95782 977 aa15.08■□□□□ 0
CASC3-201ENST00000264645 AKAP5P24588 427 aa15.08■□□□□ 0
CASC3-201ENST00000264645 ELK4P28324 431 aa15.08■□□□□ 0
CASC3-201ENST00000264645 PCSK1P29120 753 aa15.08■□□□□ 0
CASC3-201ENST00000264645 PNPLA4P41247 253 aa15.08■□□□□ 0
CASC3-201ENST00000264645 ARHGEF7Q14155 803 aa15.08■□□□□ 0
CASC3-201ENST00000264645 PSMD5Q16401 504 aa15.08■□□□□ 0
CASC3-201ENST00000264645 INTS11Q5TA45 600 aaKnown RBP15.08■□□□□ 0
CASC3-201ENST00000264645 ESRP1Q6NXG1 681 aaKnown RBP15.08■□□□□ 0
CASC3-201ENST00000264645 CCDC185Q8N715 623 aa15.08■□□□□ 0
CASC3-201ENST00000264645 KATNAL1Q9BW62 490 aa15.08■□□□□ 0
CASC3-201ENST00000264645 ELOVL6Q9H5J4 265 aa15.08■□□□□ 0
CASC3-201ENST00000264645 KAT8Q9H7Z6 458 aaKnown RBP15.08■□□□□ 0
CASC3-201ENST00000264645 ARHGEF4Q9NR80 690 aa15.08■□□□□ 0
CASC3-201ENST00000264645 SMOXQ9NWM0 555 aa15.08■□□□□ 0
CASC3-201ENST00000264645 SPASTQ9UBP0 616 aa15.08■□□□□ 0
CASC3-201ENST00000264645 SNNO75324 88 aaPredicted RBP15.08■□□□□ 0
CASC3-201ENST00000264645 USP17L7P0C7H9 530 aa15.08■□□□□ 0
CASC3-201ENST00000264645 PIRTP0C851 137 aa15.08■□□□□ 0
CASC3-201ENST00000264645 UMPSP11172 480 aa15.08■□□□□ 0
CASC3-201ENST00000264645 CES1P23141 567 aa15.08■□□□□ 0
CASC3-201ENST00000264645 PMS2P3Q13401 168 aa15.08■□□□□ 0
CASC3-201ENST00000264645 ANKDD1AQ495B1 522 aa15.08■□□□□ 0
CASC3-201ENST00000264645 DCDC5Q6ZRR9 648 aa15.08■□□□□ 0
CASC3-201ENST00000264645 HDDC2Q7Z4H3 204 aa15.08■□□□□ 0
CASC3-201ENST00000264645 MUS81Q96NY9 551 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms