RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MERTKQ12866 999 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 BNIP3Q12983 259 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 UBXN11Q5T124 520 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 C16orf87Q6PH81 154 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 ERMP1Q7Z2K6 904 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 C14orf80Q86SX3 495 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 ARHGAP12Q8IWW6 846 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 FCRL5Q96RD9 977 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CXorf21Q9HAI6 301 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 J3QRK9 145 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 AP3B1O00203 1094 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CXCL11O14625 94 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 GRIK1P39086 918 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 SERPINH1P50454 418 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 SCAPQ12770 1279 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM207Q6UWW9 146 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CIR1Q86X95 450 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CAMK1DQ8IU85 385 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 EPHX4Q8IUS5 362 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CMTR2Q8IYT2 770 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 MIER2Q8N344 545 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 PTERQ96BW5 349 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 FBXL8Q96CD0 374 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 ADNPQ9H2P0 1102 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 SP110Q9HB58 689 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 TMEM181Q9P2C4 612 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 MYLKQ15746 1914 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 RRN3P2A6NIE6 340 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 KPNA6O60684 536 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 ATE1O95260 518 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CCNCP24863 283 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 TRAF2Q12933 501 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 GALNT3Q14435 633 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 NHSL2Q5HYW2 709 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 PATL1Q86TB9 770 aaKnown RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CCDC126Q96EE4 140 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 B3GALT6Q96L58 329 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-201ENST00000263856 CATSPERBQ9H7T0 1116 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 MIOSQ9NXC5 875 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
CHMP3-201ENST00000263856 ARPC2O15144 300 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 MATN3O15232 486 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TPP2P29144 1249 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 SLC10A7Q0GE19 358 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 PPP1R8Q12972 351 aaKnown RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TIGD2Q4W5G0 525 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 UNC50Q53HI1 259 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 FGD3Q5JSP0 725 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 ZNF678Q5SXM1 525 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 OGFOD2Q6N063 350 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TMEM214Q6NUQ4 689 aaKnown RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 SLC15A3Q8IY34 581 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 CASP10Q92851 521 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TRIM15Q9C019 465 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 SARS2Q9NP81 518 aaKnown RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 UXTQ9UBK9 157 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 CD300AQ9UGN4 299 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 A0A0G2JMZ2 1700 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 A0A1B0GTL3 188 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 SNAP29O95721 258 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 THP07101 528 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 MAP4P27816 1152 aaKnown RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 NUP107P57740 925 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 CTBSQ01459 385 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 MFSD10Q14728 455 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 ZNF792Q3KQV3 632 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 KIAA0930Q6ICG6 404 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-201ENST00000263856 SLC22A9Q8IVM8 553 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 GPC2Q8N158 579 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 GPR152Q8TDT2 470 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TFAP2CQ92754 450 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 ANKRD60Q9BZ19 345 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 ING2Q9H160 280 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 MAP10Q9P2G4 905 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
CHMP3-201ENST00000263856 AZIN1O14977 448 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 HCAR3P49019 387 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms