RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 C16orf59Q7L2K0 433 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZBTB46Q86UZ6 589 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 KBTBD6Q86V97 674 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 COL23A1Q86Y22 540 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 HIPK1Q86Z02 1210 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PSTKQ8IV42 348 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CEP97Q8IW35 865 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 RMDN3Q96TC7 470 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PITPNM3Q9BZ71 974 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 LRRC4Q9HBW1 653 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ING3Q9NXR8 418 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 TFR2Q9UP52 801 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 SORCS3Q9UPU3 1222 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 AP4S1Q9Y587 144 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ABCB11O95342 1321 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 FRMPD4Q14CM0 1322 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L10C9JJH3 530 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CLPXO76031 633 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 F9P00740 461 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 WARSP23381 471 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 CXCR5P32302 372 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PCGF2P35227 344 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 HK3P52790 923 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 GALNT2Q10471 571 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 LMAN2Q12907 356 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PRKD1Q15139 912 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 RUNDC3AQ59EK9 446 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 KRT40Q6A162 431 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 GDPD3Q7L5L3 318 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 OTOAQ7RTW8 1153 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 METTL4Q8N3J2 472 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 NSUN6Q8TEA1 469 aaKnown RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF384Q8TF68 577 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 FAM216AQ8WUB2 273 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ROBO4Q8WZ75 1007 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 MS4A14Q96JA4 679 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF558Q96NG5 402 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 KLHL32Q96NJ5 620 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 SERPINB11Q96P15 392 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 LENG8Q96PV6 779 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-201ENST00000258733 DOK1Q99704 481 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 C11orf49Q9H6J7 331 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ANLNQ9NQW6 1124 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZSCAN32Q9NX65 697 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF224Q9NZL3 707 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 RNF14Q9UBS8 474 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHA4Q9UN74 947 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 MFHAS1Q9Y4C4 1052 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHB5Q9Y5E4 795 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 PHLPP1O60346 1717 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ATP7BP35670 1465 aa7.76□□□□□ -1.17
GPNMB-201ENST00000258733 ROBO1Q9Y6N7 1651 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 NRXN3Q9Y4C0 1643 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 NALCNQ8IZF0 1738 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF780AO75290 641 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TADA2AO75478 443 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 NDST3O95803 873 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FGGP02679 453 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ODC1P11926 461 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF8P17098 575 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MAT2AP31153 395 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 HNRNPH3P31942 346 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 NUP62P37198 522 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 BCAMP50895 628 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ERVK-9P63128 1117 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 IFITM3Q01628 133 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 RPL6Q02878 288 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ARID5AQ03989 594 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 C1QBPQ07021 282 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SCARB2Q14108 478 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TRIP10Q15642 601 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ALG11Q2TAA5 492 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FAM214AQ32MH5 1076 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FBXO46Q6PJ61 603 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DPY19L3Q6ZPD9 716 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 CROCCP2Q86T23 111 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FAM160B2Q86V87 743 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SLC9A9Q8IVB4 645 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 THEM5Q8N1Q8 247 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MB21D1Q8N884 522 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SLC24A4Q8NFF2 622 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 OR4M2Q8NGB6 313 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 OR10J5Q8NHC4 309 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 PIWIL2Q8TC59 973 aaKnown RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MAGEE2Q8TD90 523 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ESR2Q92731 530 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 RIT1Q92963 219 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 ACDQ96AP0 544 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 LRRC39Q96DD0 335 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 FAM213AQ9BRX8 229 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 DUSP26Q9BV47 211 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 TEKT3Q9BXF9 490 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 BTBD1Q9H0C5 482 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MORF4L1Q9UBU8 362 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 SCML1Q9UN30 329 aa7.75□□□□□ -1.17
GPNMB-201ENST00000258733 MAGED2Q9UNF1 606 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-201ENST00000258733 JAG2Q9Y219 1238 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms