RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SCUBE2Q9NQ36 999 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 PPM1HQ9ULR3 514 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 SDHDO14521 159 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 SOD2P04179 222 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 NUDT2P50583 147 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 HTRA3P83110 453 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 TLE2Q04725 743 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 PTPRRQ15256 657 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 CXorf57Q6NSI4 855 aaKnown RBP21.69■■□□□ 1.06
CLN6-201ENST00000249806 CUZD1Q86UP6 607 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 AUTS2Q8WXX7 1259 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 MAELQ96JY0 434 aaKnown RBP21.69■■□□□ 1.06
CLN6-201ENST00000249806 RNF208Q9H0X6 261 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 PACSIN3Q9UKS6 424 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 TBC1D30Q9Y2I9 924 aa21.69■■□□□ 1.06
CLN6-201ENST00000249806 SNAP91O60641 907 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 CRTAMO95727 393 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 CD1DP15813 335 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 ZNF140P52738 457 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 STC1P52823 247 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 IKBKEQ14164 716 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 SLC39A5Q6ZMH5 540 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 GLT6D1Q7Z4J2 308 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 EXT2Q93063 718 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 VWCEQ96DN2 955 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 SLC22A12Q96S37 553 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 TDRD1Q9BXT4 1180 aaKnown RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 RETREG1Q9H6L5 497 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 NLE1Q9NVX2 485 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 A0A0U1RQS6 177 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 TRPC5OSA6NMA1 111 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 UBFD1O14562 309 aaKnown RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 BAG2O95816 211 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 CD160O95971 181 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 C1RP00736 705 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 F11P03951 625 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 ATP6V1C1P21283 382 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 SLC26A3P40879 764 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 C1QTNF8P60827 252 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 AP2B1P63010 937 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 ARF5P84085 180 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 CYLC2Q14093 348 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 TRIM60Q495X7 471 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 ANKRD33Q7Z3H0 272 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 SDCCAG8Q86SQ7 713 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 SETD3Q86TU7 594 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 FBXW8Q8N3Y1 598 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 RP9Q8TA86 221 aaKnown RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 PYDC1Q8WXC3 89 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 GSTO2Q9H4Y5 243 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 POLR3BQ9NW08 1133 aaPredicted RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 PCDH10Q9P2E7 1040 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 POMPQ9Y244 141 aa21.68■■□□□ 1.06
CLN6-201ENST00000249806 COPG1Q9Y678 874 aaKnown RBP21.68■■□□□ 1.06
CLN6-201ENST00000249806 UBA6A0AVT1 1052 aaPredicted RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 EIF4E1BA6NMX2 242 aaKnown RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 SUPT7LO94864 414 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 IMPDH1P20839 514 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 CDKN1CP49918 316 aaPredicted RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 TWF1Q12792 350 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 CHST9Q7L1S5 443 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 DNAJB7Q7Z6W7 309 aaPredicted RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 TMEM150AQ86TG1 271 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 SLC22A9Q8IVM8 553 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 HIPK4Q8NE63 616 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 TTC16Q8NEE8 873 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 LPCAT1Q8NF37 534 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 EML4Q9HC35 981 aaKnown RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 ZBTB26Q9HCK0 441 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 OGDHLQ9ULD0 1010 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 RAI2Q9Y5P3 530 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 ZNF37AP17032 561 aaPredicted RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 DSG1Q02413 1049 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 CCNIQ14094 377 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 RFTN1Q14699 578 aaPredicted RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 CEP70Q8NHQ1 597 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 AARSD1Q9BTE6 412 aaKnown RBP21.67■■□□□ 1.06
CLN6-201ENST00000249806 RIMKLBQ9ULI2 386 aa21.67■■□□□ 1.06
CLN6-201ENST00000249806 H3BMM5 538 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 PRRG1O14668 218 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 OGNP20774 298 aaKnown RBP21.66■■□□□ 1.06
CLN6-201ENST00000249806 MZF1P28698 734 aaPredicted RBP21.66■■□□□ 1.06
CLN6-201ENST00000249806 ABL2P42684 1182 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 TYSND1Q2T9J0 566 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 ZNF678Q5SXM1 525 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 TPGS2Q68CL5 300 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 MAB21L3Q8N8X9 362 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 SLC26A7Q8TE54 656 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 STON2Q8WXE9 905 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 RCN3Q96D15 328 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 ANGPTL2Q9UKU9 493 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 FAM50BQ9Y247 325 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 COL4A6Q14031 1691 aa21.66■■□□□ 1.06
CLN6-201ENST00000249806 SNUPNO95149 360 aaKnown RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 MBL2P11226 248 aaPredicted RBP21.65■■□□□ 1.06
CLN6-201ENST00000249806 FMO4P31512 558 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 MTTPP55157 894 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 CDH13P55290 713 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 ZXDBP98169 803 aa21.65■■□□□ 1.06
CLN6-201ENST00000249806 PDAP1Q13442 181 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms