RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.34
LSM8-201ENST00000249299 EXOC1LA0A1B0GW35 172 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 A0A1W2PQF6 199 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 KPNA3O00505 521 aaPredicted RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 AREL1O15033 823 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 STX7O15400 261 aaKnown RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 ADAM23O75077 832 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 RNF40O75150 1001 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 SASH3O75995 380 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 IL1BP01584 269 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 HOXB2P14652 356 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 COL9A1P20849 921 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 NMBRP28336 390 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 VIPR1P32241 457 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 ARCN1P48444 511 aaKnown RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 SERPINB9P50453 376 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 NEK3P51956 506 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 SATB1Q01826 763 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 ZNF844Q08AG5 666 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 SEPT6Q14141 434 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 ARHGEF7Q14155 803 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 CST6Q15828 149 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 CNGA3Q16281 694 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 C2orf27AQ580R0 203 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 FBXL19Q6PCT2 694 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
LSM8-201ENST00000249299 DPPA4Q7L190 304 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 ZSWIM9Q86XI8 627 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 GJD3Q8N144 294 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 GOLGA6L1Q8N7Z2 621 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 GPR150Q8NGU9 434 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 SLC44A1Q8WWI5 657 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 TCF12Q99081 682 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 GPR63Q9BZJ6 419 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 APPL1Q9UKG1 709 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 SPO11Q9Y5K1 396 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 TICRRQ7Z2Z1 1910 aa12.95□□□□□ -0.34
LSM8-201ENST00000249299 C1orf232A0A0U1RR37 186 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 PFDN6O15212 129 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 MAP3K7O43318 606 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 MYZAPP0CAP1 466 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ATP5DP30049 168 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 MMP12P39900 470 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ABL2P42684 1182 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 MAGEA9P43362 315 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 DGKEP52429 567 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 COPAP53621 1224 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 SEC13P55735 322 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 DCDC1P59894 354 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 PRAMEP78395 509 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 CREB5Q02930 508 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 DNAJC3Q13217 504 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 THOC5Q13769 683 aaKnown RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 KBTBD12Q3ZCT8 623 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 AARS2Q5JTZ9 985 aaKnown RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ADGRD1Q6QNK2 874 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 AFTPHQ6ULP2 937 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 CRTC1Q6UUV9 634 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 PARS2Q7L3T8 475 aaKnown RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 KBTBD6Q86V97 674 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 KCNMB4Q86W47 210 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 NRSN1Q8IZ57 195 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ZNF366Q8N895 744 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ZNF778Q96MU6 729 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 PLEKHG4BQ96PX9 1271 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 CPNE1Q99829 537 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 MTG2Q9H4K7 406 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 LTB4R2Q9NPC1 389 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 PCDH12Q9NPG4 1184 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 C20orf96Q9NUD7 363 aaPredicted RBP12.94□□□□□ -0.34
LSM8-201ENST00000249299 ZFATQ9P243 1243 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 LGALS13Q9UHV8 139 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 FZD4Q9ULV1 537 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 ARL5AQ9Y689 179 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 UNC80Q8N2C7 3258 aa12.94□□□□□ -0.34
LSM8-201ENST00000249299 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 NPIPB15A6NHN6 443 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 AGPSO00116 658 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TSPAN6O43657 245 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 FAM155BO75949 473 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 VAPBO95292 243 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 SHBGP04278 402 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms