RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ATG2BQ96BY7 2078 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 APODP05090 189 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 FOSL2P15408 326 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 GMPRP36959 345 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 PGGT1BP53609 377 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 GRM3Q14832 879 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 PRPF38BQ5VTL8 546 aaKnown RBP18.61■□□□□ 0.57
SNX17-201ENST00000233575 ZC3HC1Q86WB0 502 aaKnown RBP18.61■□□□□ 0.57
SNX17-201ENST00000233575 OTUD6BQ8N6M0 293 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 ANKRD42Q8N9B4 389 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 MGARPQ8TDB4 240 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 VPS39Q96JC1 886 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 FAM167BQ9BTA0 163 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 IL17CQ9P0M4 197 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 THAP10Q9P2Z0 257 aaPredicted RBP18.61■□□□□ 0.57
SNX17-201ENST00000233575 MYO10Q9HD67 2058 aa18.61■□□□□ 0.57
SNX17-201ENST00000233575 SCN8AQ9UQD0 1980 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 TPP1O14773 563 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 STX7O15400 261 aaKnown RBP18.6■□□□□ 0.57
SNX17-201ENST00000233575 TYROBPO43914 113 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 HAUS5O94927 633 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 LHCGRP22888 699 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 HMGCLP35914 325 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 LRRC14Q15048 493 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 CMC1Q7Z7K0 106 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 CILP2Q8IUL8 1156 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 SLC44A3Q8N4M1 653 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 DCLK2Q8N568 766 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 MTBPQ96DY7 904 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 CAB39LQ9H9S4 337 aa18.6■□□□□ 0.57
SNX17-201ENST00000233575 GPR39O43194 453 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 TOP3BO95985 862 aaKnown RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 PSMA3P25788 255 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CNTFP26441 200 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CTHP32929 405 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 RPA3P35244 121 aaPredicted RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 SPRP35270 261 aaPredicted RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 WASP42768 502 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CDKN1CP49918 316 aaPredicted RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 CNSTQ6PJW8 725 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CRTC1Q6UUV9 634 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 SPNS2Q8IVW8 549 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 BANPQ8N9N5 519 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 OR4L1Q8NH43 312 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 SCRN2Q96FV2 425 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 P2RY13Q9BPV8 354 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 PHF7Q9BWX1 381 aaPredicted RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 ZFYVE1Q9HBF4 777 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 HEBP1Q9NRV9 189 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 PPIL1Q9Y3C6 166 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 F5P12259 2224 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 EDDM13A0A1B0GTR0 161 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 GOLGA8CPA6NN73 597 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 SPECC1L-ADORA2AF8WAN1 911 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 K7EQS6 105 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CD3EAPO15446 510 aaKnown RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 MDH1P40925 334 aaKnown RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 CSE1LP55060 971 aaKnown RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 SEC13P55735 322 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 PDE1BQ01064 536 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 SLC18A2Q05940 514 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 PEX6Q13608 980 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 UCMAQ8WVF2 138 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 SPOCK2Q92563 424 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 HLA-CQ95604 372 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 MCCC1Q96RQ3 725 aaPredicted RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 LYSMD1Q96S90 227 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 RHOJQ9H4E5 214 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 CNOT10Q9H9A5 744 aaKnown RBP18.59■□□□□ 0.57
SNX17-201ENST00000233575 PCMTD2Q9NV79 361 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 NSMCE4AQ9NXX6 385 aa18.59■□□□□ 0.57
SNX17-201ENST00000233575 NARSO43776 548 aaKnown RBP18.58■□□□□ 0.56
SNX17-201ENST00000233575 UGP2Q16851 508 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 PPM1JQ5JR12 505 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 LRRC66Q68CR7 880 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 TIFABQ6ZNK6 161 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 CDHR3Q6ZTQ4 885 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 CALML6Q8TD86 181 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 FAM96AQ9H5X1 160 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 CATSPERZQ9NTU4 200 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 B4GALT6Q9UBX8 382 aa18.58■□□□□ 0.56
SNX17-201ENST00000233575 FAM47DPA6NHR8 397 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 PRPF4O43172 522 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNX17-201ENST00000233575 EPHX1P07099 455 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 TIMP2P16035 220 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 MC4RP32245 332 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 ZNF805Q5CZA5 627 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 BRAT1Q6PJG6 821 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 USP45Q70EL2 814 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 DEFB123Q8N688 67 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 FAM129BQ96TA1 746 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 CAPS2Q9BXY5 557 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 SLC13A1Q9BZW2 595 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 STARD13Q9Y3M8 1113 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 PKP3Q9Y446 797 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 PIAS3Q9Y6X2 628 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 TRIOO75962 3097 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 COL6A3P12111 3177 aa18.57■□□□□ 0.56
SNX17-201ENST00000233575 TSPAN11A1L157 253 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms