RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
UPK1A-201ENST00000222275 PCDH9Q9HC56 1237 aa13.7□□□□□ -0.22
UPK1A-201ENST00000222275 PCDHB9Q9Y5E1 797 aa13.7□□□□□ -0.22
UPK1A-201ENST00000222275 PCDHGC4Q9Y5F7 938 aa13.7□□□□□ -0.22
UPK1A-201ENST00000222275 NEMP1O14524 444 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 FANCGO15287 622 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 FZD6O60353 706 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 CAPNS1P04632 268 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 CYP2A6P11509 494 aaPredicted RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 CD68P34810 354 aaPredicted RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 DEKP35659 375 aaKnown RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 CDK18Q07002 472 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 TRAF2Q12933 501 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 BNIP3Q12983 259 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 SYDE1Q6ZW31 735 aaPredicted RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 USP45Q70EL2 814 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 PARS2Q7L3T8 475 aaKnown RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 PRPF39Q86UA1 669 aaKnown RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 SETD7Q8WTS6 366 aaKnown RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 SERAC1Q96JX3 654 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 RBM15Q96T37 977 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 FSD1LQ9BXM9 530 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 PCYOX1Q9UHG3 505 aa13.69□□□□□ -0.22
UPK1A-201ENST00000222275 ZFR2Q9UPR6 939 aaKnown RBP13.69□□□□□ -0.22
UPK1A-201ENST00000222275 ACACAQ13085 2346 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 A0A1B0GTQ1 180 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 TTC24A2A3L6 582 aaPredicted RBP13.68□□□□□ -0.22
UPK1A-201ENST00000222275 E7EVH7 732 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 AP3B1O00203 1094 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 PMPCBO75439 489 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 DKK1O94907 266 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 ECEL1O95672 775 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 CER1O95813 267 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 MMP2P08253 660 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 FTH1P19P0C7X4 201 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 TIMP2P16035 220 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 HLA-DPA1P20036 260 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 CD38P28907 300 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 KCNJ1P48048 391 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 GDF10P55107 478 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 FGL2Q14314 439 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 ST3GAL2Q16842 350 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 ZNF284Q2VY69 593 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 SEL1L3Q68CR1 1132 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 IL27RAQ6UWB1 636 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 KDM7AQ6ZMT4 941 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 LINC00523Q86TU6 105 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 RAVER1Q8IY67 606 aaKnown RBP13.68□□□□□ -0.22
UPK1A-201ENST00000222275 RHBDD1Q8TEB9 315 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 SLCO2A1Q92959 643 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 SCRN2Q96FV2 425 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 LRRC40Q9H9A6 602 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 PPIL1Q9Y3C6 166 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 PCDHGB2Q9Y5G2 931 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 FADS3Q9Y5Q0 445 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
UPK1A-201ENST00000222275 A0A1W2PQU0 124 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 FAM221BA6H8Z2 402 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 ESPNB1AK53 854 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 ANKRD66B4E2M5 251 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 TLR4O00206 839 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 NDC80O14777 642 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 AREL1O15033 823 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 SLC31A1O15431 190 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 SPINT1O43278 529 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 ZNF500O60304 480 aaPredicted RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 RNGTTO60942 597 aaKnown RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 PCDH8O95206 1070 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 NDST3O95803 873 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 KRT14P02533 472 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 PROS1P07225 676 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 ITIH2P19823 946 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 PSMB4P28070 264 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 LMAN1P49257 510 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 WNT3AP56704 352 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 NXPH1P58417 271 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 RPS21P63220 83 aaKnown RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
UPK1A-201ENST00000222275 PPP1R7Q15435 360 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 TEAD4Q15561 434 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 TMEM52BQ4KMG9 183 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 NAPEPLDQ6IQ20 393 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 KANSL1Q7Z3B3 1105 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 GLRX5Q86SX6 157 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 SPATA4Q8NEY3 305 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
UPK1A-201ENST00000222275 CXorf40AQ8TE69 158 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms