RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TKTL2Q9H0I9 626 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 RAD21L1Q9H4I0 556 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 PIP5K1BO14986 540 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 TSPAN1O60635 241 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 C22orf31O95567 290 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 DIO3P55073 304 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 CATSPER4Q7RTX7 472 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 ADGRG5Q8IZF4 528 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 NRBF2Q96F24 287 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 C1orf50Q9BV19 199 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 SLAMF8Q9P0V8 285 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 RCOR3Q9P2K3 495 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 TIMM22Q9Y584 194 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 CCT8P50990 548 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 OCA2Q04671 838 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 MFSD2AQ8NA29 543 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 FAR2Q96K12 515 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 NSUN5Q96P11 429 aaKnown RBP20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 UHRF1Q96T88 793 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 CDH7Q9ULB5 785 aa20.11■□□□□ 0.81
PPP1R3F-201ENST00000055335 TGFB3P10600 412 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 NFKBIAP25963 317 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 TTKP33981 857 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 FAM45BPQ6NSW5 357 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 MIER2Q8N344 545 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 TRPV3Q8NET8 790 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 ZNF420Q8TAQ5 688 aaPredicted RBP20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 FAM45AQ8TCE6 357 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 SEZ6LQ9BYH1 1024 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 WDCPQ9H6R7 721 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 ADAMTS5Q9UNA0 930 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 TCAF1Q9Y4C2 921 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 OR51F1A6NGY5 319 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 LRIG2O94898 1065 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 LTA4HP09960 611 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 IST1P53990 364 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 PFKFB4Q16877 469 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 INTS11Q5TA45 600 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 NIPAL1Q6NVV3 410 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 LRRC58Q96CX6 371 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 KIFC1Q9BW19 673 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 IGSF5Q9NSI5 407 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 ERGIC3Q9Y282 383 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 RAD54BQ9Y620 910 aa20.1■□□□□ 0.81
PPP1R3F-201ENST00000055335 NCF1BA6NI72 391 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 NCF1CA8MVU1 366 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 DYNC1LI2O43237 492 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 SNAP91O60641 907 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 NCF1P14598 390 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 SLC6A2P23975 617 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ARNTP27540 789 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 FAM117BQ6P1L5 589 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ANKRD13AQ8IZ07 590 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 NPY6RQ99463 290 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 HNRNPABQ99729 332 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ALG2Q9H553 416 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ERAP1Q9NZ08 941 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ANAPC2Q9UJX6 822 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 RBM47A0AV96 593 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 TTC24A2A3L6 582 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CLPXO76031 633 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 IL1RL1Q01638 556 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 LIPEQ05469 1076 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ATP6AP1Q15904 470 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 TECRLQ5HYJ1 363 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ITIH5Q86UX2 942 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 SH3RF2Q8TEC5 729 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CHPT1Q8WUD6 406 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 HSFY1Q96LI6 401 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ZNF638Q14966 1978 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 ERI2A8K979 691 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 RASAL1O95294 804 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 PARNO95453 639 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CYP2C9P11712 490 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 GFAPP14136 432 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 IDUAP35475 653 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 GSK3BP49841 420 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CCNYL2Q5T2Q4 361 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CRTC3Q6UUV7 619 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 SFRP1Q8N474 314 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 CHID1Q9BWS9 393 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 GJD2Q9UKL4 321 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 TRHDEQ9UKU6 1024 aa20.09■□□□□ 0.81
PPP1R3F-201ENST00000055335 C19orf81C9J6K1 198 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 ACOX3O15254 700 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 SH3BP2P78314 561 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 PLA2G4EQ3MJ16 856 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 PYCR3Q53H96 274 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 C9orf57Q5W0N0 161 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 LARP4Q71RC2 724 aaKnown RBP eCLIP20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 PLPPR4Q7Z2D5 763 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 PTGR2Q8N8N7 351 aaPredicted RBP20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 SEMA4BQ9NPR2 832 aaPredicted RBP20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 GNPTGQ9UJJ9 305 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 DNAJC15Q9Y5T4 150 aa20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 GPC6Q9Y625 555 aaPredicted RBP20.08■□□□□ 0.81
PPP1R3F-201ENST00000055335 NOBOXO60393 691 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms