RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Umodl1Q5DID3 1319 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Baz2aQ91YE5 1889 aaKnown RBP25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Unc5cO08747 931 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cldn2O88552 230 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Fam47cQ14BE7 430 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Fam8a1Q3URQ4 399 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ints6Q6PCM2 883 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cand2Q6ZQ73 1235 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Adam32Q8K410 754 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ddx50Q99MJ9 734 aaKnown RBP25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Rgs10Q9CQE5 181 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Tchhl1Q9D3P1 638 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Gucy1a3Q9ERL9 691 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Aldh1a3Q9JHW9 512 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Nfs1Q9Z1J3 459 aa25.81■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Prrg1A2BFE8 218 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Gm1141B9EJU1 475 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Vmn2r54K7N649 806 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 P01669 111 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 RabggtbP53612 339 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Mpp1P70290 466 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Zbtb2Q3V3W4 514 aaKnown RBP25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Tnfaip2Q61333 691 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Echs1Q8BH95 290 aaKnown RBP25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Tfb1mQ8JZM0 345 aaKnown RBP25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 StambpQ9CQ26 424 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Lrrc46Q9DAP0 323 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Sgk2Q9QZS5 367 aa25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Nup205A0A0J9YUD5 2061 aaKnown RBP25.8■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ighg3A0A1Y7VJN6 399 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Zfp846G3X996 541 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Smpd2O70572 419 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Casp2P29594 452 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Adra1dP97714 562 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 G2e3Q5RJY2 716 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Pabpn1lQ5XFR0 273 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Syt14Q7TN84 555 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Sfr1Q8BP27 319 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Tgif2Q8C0Y1 237 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Usp45Q8K387 813 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Appl1Q8K3H0 707 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 PompQ9CQT5 141 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Pias4Q9JM05 507 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cep350E9Q309 3095 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Lilra6A0A0B4J1F3 663 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 SelenovD3YXG1 328 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ifrd1P19182 449 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Fen1P39749 378 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Rab33aP97950 237 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 PtprrQ62132 656 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Klhl29Q80T74 875 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Arhgef38Q80VK6 770 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cnpy4Q8BQ47 245 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cfap61Q8CEL2 1252 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 TwnkQ8CIW5 685 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Med17Q8VCD5 649 aaKnown RBP25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Olfr342Q8VGK7 312 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ska2Q9CR46 120 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Zfp773Q9CZ29 471 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Pgm1Q9D0F9 562 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Snrnp48Q9D361 337 aa25.79■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Slfn8B1ARD8 910 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cd151O35566 253 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Il6raP22272 460 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 CryaaP24622 196 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Atp5bP56480 529 aaKnown RBP25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Rnf215Q5SPX3 379 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 GpamQ61586 827 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Alkbh8Q80Y20 664 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Pofut2Q8VHI3 429 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Pcdhb18Q91Y02 792 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ppp1r16aQ923M0 524 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Kbtbd12Q9D618 625 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Csnk1dQ9DC28 415 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Cngb3Q9JJZ9 694 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Malrd1A2AJX4 2123 aa25.78■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Gm4924A0A1B0GR71 966 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Gm14459A2BI73 179 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 P01807 119 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 AldoaP05064 364 aaKnown RBP25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Adra2bP30545 450 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Mrps6P58064 125 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Kir3dl1P83555 432 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Sec31bQ3TZ89 1158 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Taar7eQ5QD09 358 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 BadQ61337 204 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Foxj1Q61660 421 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Zfp91Q62511 572 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Smg5Q6ZPY2 1017 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 ItchQ8C863 864 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Podxl2Q8CAE9 603 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Zbtb9Q8CDC7 459 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Tgif2lx2Q8K5B9 231 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Nae1Q8VBW6 534 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Olfr1325Q8VF43 315 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Olfr1019Q8VGS3 310 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Ndc80Q9D0F1 642 aaKnown RBP25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Q9D5Y0 588 aa25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Rpn2Q9DBG6 631 aaKnown RBP25.77■■□□□ 1.72
Tpm1-216ENSMUST00000113707 Rsrc1Q9DBU6 334 aa25.77■■□□□ 1.72
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms