RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Itga1Q3V3R4 1179 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Spata7Q80VP2 582 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Oscp1Q8BHW2 379 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cgref1Q8R1U2 281 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Arl10Q9QXJ4 243 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Zscan12Q9Z1D7 501 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vmn2r54K7N649 806 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kcna3P16390 528 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rps24P62849 133 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rnf145Q5SWK7 663 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 HnrnpdQ60668 355 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Zswim5Q80TC6 1188 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Atp2c1Q80XR2 918 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Wasf2Q8BH43 497 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rap2cQ8BU31 183 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tdrd7Q8K1H1 1086 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Eml3Q8VC03 897 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Olfr847Q8VFF4 312 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dnajc14Q921R4 703 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cyp2j9Q924D1 502 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tmem80Q9D3H0 123 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Haus5Q9D786 619 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mkrn2Q9ERV1 416 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dmap1Q9JI44 468 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Thap11Q9JJD0 305 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Spp1P10923 294 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mc1rQ01727 315 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Trcg1Q58Y74 825 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Bpifb1Q61114 474 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dna2Q6ZQJ5 1062 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Il36gQ8R460 164 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ccdc92Q8VDN4 314 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Olfr1019Q8VGS3 310 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Pcdha6Q91Y14 946 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cyp4f13Q99N19 523 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Trap1Q9CQN1 706 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Oser1Q9D722 291 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cmtm7Q9ESD6 167 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ern2Q9Z2E3 911 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kif1cO35071 1100 aaKnown RBP11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Prrg3Q6PAQ9 231 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ifi44Q8BV66 422 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 SardhQ99LB7 919 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 KlbQ99N32 1043 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 CabyrQ9D424 453 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tmem265E9Q8G3 109 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Fgf18O89101 207 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Itgb7P26011 806 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hnf4aP49698 474 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Lypla1P97823 230 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 D8Ertd738eQ8R1F0 94 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ttc4Q8R3H9 386 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 GneQ91WG8 722 aaKnown RBP11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 P2yr13Q9D8I2 337 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tle2Q9WVB2 767 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 A0A1Y7VIU7 259 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Togaram2Q3TYG6 1002 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Glt8d2Q640P4 349 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Nlrp9cQ66X01 1004 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Svs1Q6WIZ7 820 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ScocQ78YZ6 125 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Serpinb9dQ8BMT0 377 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tusc3Q8BTV1 347 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 C1qtnf7Q8BVD7 289 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Psapl1Q8C1C1 522 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Acat2Q8CAY6 397 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Wdr47Q8CGF6 920 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Acsm2Q8K0L3 575 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Colec12Q8K4Q8 742 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 BniplQ99JU7 328 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ErmapQ9JLN5 566 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Nt5cQ9JM14 200 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Grm3Q9QYS2 879 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm3147A0A0J9YU88 481 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm10424A0A0J9YVD0 481 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Pabpc4lG5E8X2 370 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm7971J3QMM8 481 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 PfkmP47857 780 aaKnown RBP11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ap1s1P61967 158 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ADGRF3Q58Y75 991 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gxylt2Q810K9 444 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Q810S2 196 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 PhykplQ8R1K4 467 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Taf11Q99JX1 211 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dhx34Q9DBV3 1145 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Capn15Q9JLG8 1095 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Klhdc7bA0A286YD60 1263 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 F830016B08RikG3UWE2 416 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hoxd13P70217 339 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Akr1c6P70694 323 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Adrbk2Q3UYH7 688 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ube2r2Q6ZWZ2 238 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Chrna3Q8R4G9 499 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mat1aQ91X83 396 aaKnown RBP11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Syvn1Q9DBY1 612 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Rad9aQ9Z0F6 389 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cpxm1Q9Z100 722 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gria3Q9Z2W9 888 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm3336J3QMQ6 198 aa11.88□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Naa20P61600 178 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms