RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Eif2b4Q61749 524 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Nr2e1Q64104 385 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Dhx33Q80VY9 698 aaKnown RBP16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Lrrc15Q80X72 579 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ubap1Q8BH48 502 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Clic5Q8BXK9 251 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Vmn1r79Q8R285 306 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Eif3mQ99JX4 374 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tmem80Q9D3H0 123 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ptf1aQ9QX98 324 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Vmn2r118E9Q1C1 853 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ap2a1P17426 977 aaKnown RBP16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 FpgsP48760 587 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Slc29a2Q61672 456 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Jak3Q62137 1100 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tshz2Q68FE9 1030 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Xpnpep1Q6P1B1 623 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Snx31Q6P8Y7 439 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Smpd4Q6ZPR5 823 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr1355Q7TQU9 310 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Atp6v1hQ8BVE3 483 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Klhl12Q8BZM0 568 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mfsd5Q921Y4 450 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Lrrc4Q99PH1 652 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mrps33Q9D2R8 106 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Efhd2Q9D8Y0 240 aaKnown RBP16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Smarcb1Q9Z0H3 385 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Cyp2b23E9Q593 491 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ccdc149F6V035 524 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr694K7N641 315 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Inpp4bQ6P1Y8 924 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pqlc1Q80XM9 271 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Hspa13Q8BM72 471 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 C1qtnf7Q8BVD7 289 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Serpina11Q8CIE0 424 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tnfaip8l1Q8K288 186 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 SarafQ8R3Q0 334 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tsen15Q8R3W5 168 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 4930519G04RikQ9CPT7 205 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 TpbpbQ9CQC0 121 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Efhc2Q9D485 750 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Nusap1Q9ERH4 427 aaKnown RBP16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 PigqQ9QYT7 581 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tnfsf13bQ9WU72 309 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tnfrsf25B1AWN9 411 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Il4i1O09046 630 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Shmt1P50431 478 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 AbrQ5SSL4 859 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Kansl2Q8BQR4 486 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tyw3Q8BSA9 257 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Azin2Q8BVM4 459 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr449Q8VGW8 311 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Atad1Q9D5T0 361 aa16.62■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Fam71dD3YV92 440 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Psen1P49769 467 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Scn1bP97952 218 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Orai3Q6P8G8 290 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Trim45Q6PFY8 580 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Sra1Q80VJ2 232 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Luzp2Q8BGY3 345 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Clec1aQ8BWY2 269 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pcdhb16Q91Y03 802 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ephx1Q9D379 455 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Slc13a2Q9ES88 586 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Med20Q9R0X0 212 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Anxa6P14824 673 aaKnown RBP16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 EnpepP16406 945 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 CidecP56198 239 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 CrtamQ149L7 389 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Col28a1Q2UY11 1141 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 RfflQ6ZQM0 377 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Fam83eQ80XS7 481 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Zfp719Q8BIV1 735 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Smoc1Q8BLY1 463 aaKnown RBP16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pcdhga10Q91XY9 930 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 NktrP30415 1453 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 GabreA2AMW3 916 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pgbd1E9Q492 415 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Adgrf2E9Q4J9 644 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Kbtbd2G3X9X1 623 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 CcncQ62447 283 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Prl7c1Q9CRB5 251 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Nos1apQ9D3A8 503 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Oxct2bQ9ESL0 520 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Oxct2aQ9JJN4 520 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Il22Q9JJY9 179 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Spin2-ps6A0A140T8V2 174 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm35911A0A1D5RLS7 214 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Asna1O54984 348 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Rsbn1Q80T69 795 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Klhl26Q8BGY4 606 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Exoc3l1Q8BI71 739 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Bri3bpQ8BXV2 253 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 RhoqQ8R527 205 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pcdhb10Q91VE5 797 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tas1r3Q925D8 858 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 2310003L06RikQ9CV82 495 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Oser1Q9D722 291 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Arl10Q9QXJ4 243 aa16.61■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Med1Q925J9 1575 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms