RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Slc39a13Q8BZH0 361 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Hdac7Q8C2B3 938 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Acat2Q8CAY6 397 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ccdc28aQ8CEI3 192 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Cfap61Q8CEL2 1252 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Pnpt1Q8K1R3 783 aaKnown RBP11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Dennd1aQ8K382 1016 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Rbmx2Q8R0F5 326 aaKnown RBP11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Atg10Q8R1P4 215 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Impg1Q8R1W8 798 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Vmn1r214Q8R279 367 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Dusp15Q8R4V2 235 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 GcshQ91WK5 170 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Mrps17Q9CQE3 120 aaKnown RBP11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Fam114a1Q9D281 569 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ifi35Q9D8C4 286 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Cldn34b2Q9D9N2 209 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Socs6Q9JLY0 533 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Akap8lQ9R0L7 642 aaKnown RBP11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Fiz1Q9WTJ4 500 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Usp18Q9WTV6 368 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Nme3Q9WV85 169 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Cldn3Q9Z0G9 219 aa11.38□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ralgapa1Q6GYP7 2035 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 BC034090A0A087WP46 1202 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Lzts3A2AHG0 700 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Lonrf1D3YY23 762 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Wdr95D3Z7A8 784 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Zfp780bE9Q2S6 806 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Gm10715J3QP74 227 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Gm21962L7N280 338 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Scamp3O35609 349 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Stc1O55183 247 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 HcrtO55241 130 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Snx12O70493 165 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 P01679 107 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 TrhrP21761 393 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Tcea3P23881 347 aaKnown RBP11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Csf2rbP26955 896 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ap1m1P35585 423 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Alox12P39655 663 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 St3gal1P54751 337 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Rpl26P61255 145 aaKnown RBP11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Capza3P70190 299 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Garem1Q3UFT3 876 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 MyzapQ3UIJ9 466 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ostf1Q62422 215 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Krt12Q64291 487 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 PianpQ6P1B3 278 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Papd7Q6PB75 542 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Got1l1Q7TSV6 404 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Acat3Q80X81 397 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ankrd9Q8BH83 326 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Sumf2Q8BPG6 308 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Med19Q8C1S0 244 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ccdc159Q8C963 411 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 NaprtQ8CC86 538 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Tceal3Q8R0A5 200 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Vmn1r89Q8R256 316 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Gle1Q8R322 699 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Nae1Q8VBW6 534 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 AmotQ8VHG2 1126 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 SharpinQ91WA6 380 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Nipal2Q91WC7 383 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Fkbp6Q91XW8 327 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Trim66Q924W6 1242 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Tspan1Q99J59 240 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Dok4Q99KE3 325 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Sp2Q9D2H6 612 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Tspan17Q9D7W4 270 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Pkmyt1Q9ESG9 490 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ulk2Q9QY01 1037 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 RecqlQ9Z129 648 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Plxna2P70207 1894 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 AtmQ62388 3066 aa11.37□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Abca4O35600 2310 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Atg2bQ80XK6 2075 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ssc4dA1L0T3 586 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Zfp174B9EJW5 407 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Atp6ap1lD3Z5W0 336 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Kif6E9PX57 802 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Vmn2r118E9Q1C1 853 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Zbtb10E9Q8X5 861 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Speer2E9Q9U2 264 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Grk6O70293 576 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 P01654 111 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 P01656 111 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 P03977 111 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Drg1P32233 367 aaKnown RBP11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Limk1P53668 647 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Rpl22P67984 128 aaKnown RBP11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Gabpb1Q00420 383 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Hif3aQ0VBL6 662 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Gdpd4Q3TT99 632 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 MybphlQ5FW53 355 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Ggt1Q60928 568 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Irak1Q62406 710 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Parp6Q6P6P7 630 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Kiss1Q6Y4S4 130 aa11.36□□□□□ -0.59
Ccdc28b-201ENSMUST00000030586 Pja2Q80U04 707 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms