RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Clec4a4Q5YIR8 236 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Dmc1Q61880 340 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tead4Q62296 427 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tmem151aQ6GQT5 468 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Scube1Q6NZL8 1018 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 AtminQ6P9S1 818 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tigd3Q7TM95 470 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Dync1li1Q8R1Q8 523 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pdk3Q922H2 415 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Slc39a5Q9D856 535 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 GatmQ9D964 423 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tubb3Q9ERD7 450 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Obsl1D3YYU8 1804 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 CenpaO35216 134 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tap1P21958 724 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 RxrgP28705 463 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tial1P70318 392 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Irf7P70434 457 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 ScinQ60604 715 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Galnt10Q6P9S7 603 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ccdc151Q8BSN3 593 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Prpsap1Q9D0M1 356 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ruvbl2Q9WTM5 463 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Kiaa0100Q5SYL3 2234 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Btnl4A2CG29 586 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Cdr1E9Q0B4 517 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Cdh18E9Q9Q6 790 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Spp1P10923 294 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Hsd11b2P51661 386 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Matn1P51942 500 aaKnown RBP20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Myo1gQ5SUA5 1024 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 PtprrQ62132 656 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Foxb2Q64733 428 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Rxfp4Q7TQP4 414 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Zmpste24Q80W54 475 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Elmo2Q8BHL5 732 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Slco4a1Q8K078 723 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Zdhhc12Q8VC90 267 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Zfp65Q91W94 390 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Fam90a1bQ9D4F3 419 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Kat6aQ8BZ21 2003 aa20.24■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Vsig10l2A0A140LHF2 776 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Olfr839-ps1A0A1D5RMH6 312 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Arfip1G5E8V9 373 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pitx1P70314 315 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Colec11Q3SXB8 272 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Srbd1Q497V5 1015 aaKnown RBP20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pnma8aQ80VM8 430 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Adam32Q8K410 754 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Actr3Q99JY9 418 aaKnown RBP20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Psmd8Q9CX56 353 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Alg14Q9D081 217 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 NvlQ9DBY8 855 aaKnown RBP20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Fam43bA2AM80 330 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 9230113P08RikD3YWX3 137 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Rab10P61027 200 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 CkbQ04447 381 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Fam131bQ3TY60 332 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Zfp719Q8BIV1 735 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Smarcal1Q8BJL0 910 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tmem62Q8BXJ9 643 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Slc22a19Q8VCA0 551 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Creld1Q91XD7 420 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 PgcQ9D7R7 392 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Il1rl2Q9ERS7 574 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Nrip2Q9JHR9 270 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 PolhQ9JJN0 694 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 HttP42859 3119 aa20.23■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Sema3aO08665 772 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 P01740 135 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Slc2a4P14142 509 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Mapkapk2P49138 386 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Scn2bQ56A07 215 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Fam189bQ5HZJ5 669 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Capn11Q6J756 714 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ints7Q7TQK1 966 aaKnown RBP20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ddx18Q8K363 660 aaKnown RBP20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Vmn1r188Q8K3N2 308 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Tmbim4Q9DA39 238 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 DcpsQ9DAR7 338 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pcm1Q9R0L6 2025 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Igkv17-121A0A0G2JFA8 117 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pcna-ps2A0A140T8V5 261 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Gm21964A0A1W2P7S4 437 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Dnmt3aO88508 908 aaKnown RBP20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 PcnaP17918 261 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pitrm1Q8K411 1036 aaKnown RBP20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Olfr589Q8VGV8 317 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Fam136aQ9CR98 138 aa20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ddx39bQ9Z1N5 428 aaKnown RBP20.22■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Vwa8Q8CC88 1905 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Sgo2bJ3QMK1 1167 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Mllt10O54826 1068 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Prkag1O54950 330 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Ap1g1P22892 822 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Rps24P62849 133 aaKnown RBP20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Upf3aQ3ULJ3 422 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Pgm2l1Q8CAA7 621 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Cog4Q8R1U1 785 aa20.21■□□□□ 0.83
Ctdsp1-201ENSMUST00000027367 Olfr665Q8VG79 316 aa20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms