RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SCAMP1	O15126	338 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	FFAR2	O15552	330 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	AQP9	O43315	295 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	HEXIM1	O94992	359 aa	Known RBP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	ZRANB2	O95218	330 aa	Known RBP eCLIP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	PDHA1	P08559	390 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	C1S	P09871	688 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	CKMT2	P17540	419 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	GM2A	P17900	193 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	CA4	P22748	312 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	HTR1B	P28222	390 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	NR2C2	P49116	596 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	ACADVL	P49748	655 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	NAP1L1	P55209	391 aa	Known RBP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	NIPAL4	Q0D2K0	466 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	TFDP3	Q5H9I0	405 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	BZW1	Q7L1Q6	419 aa	Known RBP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	TMEM139	Q8IV31	216 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	PHACTR4	Q8IZ21	702 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	RCOR2	Q8IZ40	523 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	PLA2G15	Q8NCC3	412 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	ACRBP	Q8NEB7	543 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	ARRDC2	Q8TBH0	407 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	COQ10A	Q96MF6	247 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	IL12RB2	Q99665	862 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	DUSP23	Q9BVJ7	150 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	TDRD1	Q9BXT4	1180 aa	Known RBP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	LACRT	Q9GZZ8	138 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	KCTD5	Q9NXV2	234 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	NLGN3	Q9NZ94	848 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	PNMA8B	Q9ULN7	279 aa	Predicted RBP	15.07	■□□□□ 0
PHGDH-231	ENST00000641939	OR1A2	Q9Y585	309 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	CSNK1G3	Q9Y6M4	447 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	DUSP10	Q9Y6W6	482 aa		15.07	■□□□□ 0
PHGDH-231	ENST00000641939	NPIPB15	A6NHN6	443 aa	Predicted RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	PSMD11	O00231	422 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	PJA2	O43164	708 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CST8	O60676	142 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	GIMD1	P0DJR0	217 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CDK4	P11802	303 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CTPS1	P17812	591 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	TGM2	P21980	687 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	LHCGR	P22888	699 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	MARCKSL1	P49006	195 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	VAV2	P52735	878 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	EPHB1	P54762	984 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	PPARD	Q03181	441 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ZBTB17	Q13105	803 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ARHGEF7	Q14155	803 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	IHH	Q14623	411 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	NFATC4	Q14934	902 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	LLGL1	Q15334	1064 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	FAXC	Q5TGI0	409 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	KAZN	Q674X7	775 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	DENND2C	Q68D51	928 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ESRP1	Q6NXG1	681 aa	Known RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	UNQ6494/PRO21346	Q6UXR6	183 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	TMPRSS7	Q7RTY8	843 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	KIAA1328	Q86T90	577 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CCDC50	Q8IVM0	306 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CBARP	Q8N350	705 aa	Predicted RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CNTD1	Q8N815	330 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ATL2	Q8NHH9	583 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	EXD1	Q8NHP7	514 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	LMX1A	Q8TE12	382 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	KRT35	Q92764	455 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	GATA6	Q92908	595 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	NUS1	Q96E22	293 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	RBM41	Q96IZ5	413 aa	Known RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	TBATA	Q96M53	351 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	SLC13A1	Q9BZW2	595 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	TCEAL2	Q9H3H9	227 aa	Predicted RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	SEPT10	Q9P0V9	454 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	SPAST	Q9UBP0	616 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	APOBEC3B	Q9UH17	382 aa	Known RBP	15.06	■□□□□ 0
PHGDH-231	ENST00000641939	CHKB	Q9Y259	395 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	RP1	P56715	2156 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ACACA	Q13085	2346 aa		15.06	■□□□□ 0
PHGDH-231	ENST00000641939	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	15.05	■□□□□ 0
PHGDH-231	ENST00000641939	hCG_1818297	A0A087WSY0	165 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939		A0A0J9YYE9	177 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	GOLGA6L6	A8MZA4	724 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939		K7ESM1	405 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	CACNB4	O00305	520 aa	Predicted RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	RFPL3	O75679	317 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	TRBC1	P01850	177 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	ALPI	P09923	528 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	ACP1	P24666	158 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	CTNNA1	P35221	906 aa	Known RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	HNF1B	P35680	557 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	TRIM23	P36406	574 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	CD86	P42081	329 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	BLK	P51451	505 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	KIAA1024L	P59773	190 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	RPL26	P61254	145 aa	Known RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	DAB2	P98082	770 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	ILK	Q13418	452 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	PTPRR	Q15256	657 aa		15.05	■□□□□ -0
PHGDH-231	ENST00000641939	SMAD1	Q15797	465 aa	Known RBP	15.05	■□□□□ -0
PHGDH-231	ENST00000641939	PRRT3	Q5FWE3	981 aa		15.05	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms