RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 TRMT10BQ6PF06 316 aaKnown RBP19.88■□□□□ 0.77
PHGDH-210ENST00000641115 PARS2Q7L3T8 475 aaKnown RBP19.88■□□□□ 0.77
PHGDH-210ENST00000641115 LYSMD3Q7Z3D4 306 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 TTC7BQ86TV6 843 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 CDKL2Q92772 493 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 MOCS1Q9NZB8 636 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 RIMKLBQ9ULI2 386 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 NFS1Q9Y697 457 aa19.88■□□□□ 0.77
PHGDH-210ENST00000641115 NPIPB15A6NHN6 443 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ADAM23O75077 832 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ZNF844Q08AG5 666 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 PTPRRQ15256 657 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KBTBD12Q3ZCT8 623 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 CEP85LQ5SZL2 805 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 PDPK2PQ6A1A2 396 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KIAA0930Q6ICG6 404 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ZNF449Q6P9G9 518 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 CROCCP2Q86T23 111 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 OR2T3Q8NH03 318 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 PPCSQ9HAB8 311 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ZFYVE1Q9HBF4 777 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 C20orf96Q9NUD7 363 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 SLC2A6Q9UGQ3 507 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 PKP3Q9Y446 797 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KCTD3Q9Y597 815 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 SCN8AQ9UQD0 1980 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KRBA1A5PL33 1030 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 GOLGA6L10A6NI86 522 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 BUD23O43709 281 aaKnown RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 HMGCLP35914 325 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ZNF140P52738 457 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 STARD6P59095 220 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 PRAMEP78395 509 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 SATB1Q01826 763 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 MGAT5Q09328 741 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 LRRC73Q5JTD7 316 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ZNF776Q68DI1 518 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KIAA1211LQ6NV74 962 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ERAP2Q6P179 960 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 FBXL19Q6PCT2 694 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 KCNMB4Q86W47 210 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 RASSF3Q86WH2 238 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 CTAGE3PQ8IX95 158 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 TTC30BQ8N4P2 665 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 OR13J1Q8NGT2 312 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ARRDC3Q96B67 414 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 DNAJC1Q96KC8 554 aaKnown RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ROPN1BQ9BZX4 212 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 ROPN1Q9HAT0 212 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 POLR3BQ9NW08 1133 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-210ENST00000641115 B4GALT6Q9UBX8 382 aa19.87■□□□□ 0.77
PHGDH-210ENST00000641115 POC1B-GALNT4F8VUJ3 575 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 STX7O15400 261 aaKnown RBP19.86■□□□□ 0.77
PHGDH-210ENST00000641115 VAPBO95292 243 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 ADH1BP00325 375 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 TIMP2P16035 220 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 NEK3P51956 506 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 ACVR1Q04771 509 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 UBXN2BQ14CS0 331 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 EFTUD2Q15029 972 aaKnown RBP eCLIP19.86■□□□□ 0.773e-6■■■■□ 23.9
PHGDH-210ENST00000641115 CST6Q15828 149 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 KRT71Q3SY84 523 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 UNC5BQ8IZJ1 945 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 SIX5Q8N196 739 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 SYNPOQ8N3V7 929 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 GOLGA6L1Q8N7Z2 621 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 OR4K2Q8NGD2 314 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 OR13C4Q8NGS5 318 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 GABPB2Q8TAK5 448 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-210ENST00000641115 TMEM109Q9BVC6 243 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 PCDH12Q9NPG4 1184 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 NLE1Q9NVX2 485 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-210ENST00000641115 IL1RAPL1Q9NZN1 696 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 ZFATQ9P243 1243 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 FETUBQ9UGM5 382 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 MMP17Q9ULZ9 603 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 IKBKGQ9Y6K9 419 aa19.86■□□□□ 0.77
PHGDH-210ENST00000641115 ZNF106Q9H2Y7 1883 aaKnown RBP19.85■□□□□ 0.77
PHGDH-210ENST00000641115 A0A1W2PQF6 199 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 KANSL1LA0AUZ9 987 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 FAM159BA6NKW6 160 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 SMIM23A6NLE4 172 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 A8MX80 341 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 RASGRF2O14827 1237 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 TCEA3O75764 348 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 RPP40O75818 363 aaKnown RBP19.85■□□□□ 0.77
PHGDH-210ENST00000641115 CLDN7O95471 211 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 ERVK-10P10266 1014 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 CHRNB1P11230 501 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 VIPR1P32241 457 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 HADHAP40939 763 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 SUOXP51687 545 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 METAP1P53582 386 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 TMPRSS15P98073 1019 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 ARHGEF7Q14155 803 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 SMAD1Q15797 465 aaKnown RBP19.85■□□□□ 0.77
PHGDH-210ENST00000641115 LRRC66Q68CR7 880 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 CRTC1Q6UUV9 634 aa19.85■□□□□ 0.77
PHGDH-210ENST00000641115 ERN2Q76MJ5 926 aaKnown RBP19.85■□□□□ 0.77
PHGDH-210ENST00000641115 LRRC6Q86X45 466 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms