RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SEMA5AQ13591 1074 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 ARHGEF7Q14155 803 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 CDKN3Q16667 212 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-209ENST00000640289 PEAR1Q5VY43 1037 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-209ENST00000640289 CCDC70Q6NSX1 233 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 RANBP10Q6VN20 620 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 ASCL5Q7RTU5 278 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 HSD11B1LQ7Z5J1 315 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SYT12Q8IV01 421 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 GRK7Q8WTQ7 553 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SERAC1Q96JX3 654 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SLC6A18Q96N87 628 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 CDC23Q9UJX2 597 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 SHOC2Q9UQ13 582 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 ABCA7Q8IZY2 2146 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 ANKRD36A6QL64 1941 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 C1orf232A0A0U1RR37 186 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 GOLGA6BA6NDN3 693 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 E7EVH7 732 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 AURKAO14965 403 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 ECEL1O95672 775 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 SLC4A1P02730 911 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 FGF1P05230 155 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 RETP07949 1114 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 ETV3P41162 512 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 CLDN2P57739 230 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 PTSQ03393 145 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 GPS1Q13098 491 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 SGCGQ13326 291 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 ACOX1Q15067 660 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 NAPEPLDQ6IQ20 393 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 RFLNAQ6ZTI6 216 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 LYSMD3Q7Z3D4 306 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 DCLK2Q8N568 766 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 SPATA4Q8NEY3 305 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 EID2BQ96D98 161 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 COQ10AQ96MF6 247 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 KRT12Q99456 494 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 KLF6Q99612 283 aaPredicted RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 LRRC40Q9H9A6 602 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 TM9SF3Q9HD45 589 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 MBNL1Q9NR56 388 aaKnown RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 PIH1D1Q9NWS0 290 aaKnown RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 NCDNQ9UBB6 729 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 PCYOX1Q9UHG3 505 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 TPX2Q9ULW0 747 aaKnown RBP13.22□□□□□ -0.29
GTF3A-209ENST00000640289 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 PCDHGA5Q9Y5G8 931 aa13.22□□□□□ -0.29
GTF3A-209ENST00000640289 DMDP11532 3685 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 H0Y8X5 98 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 PSMD3O43242 534 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 GAS8O95995 478 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 WNT1P04628 370 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 ZNF30P17039 623 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 HNRNPA2B1P22626 353 aaKnown RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 GRIA1P42261 906 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 LMAN1P49257 510 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 CSNK1EP49674 416 aaKnown RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 MRPS25P82663 173 aaKnown RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 MSLNQ13421 630 aaPredicted RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 PPP1R7Q15435 360 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 C4orf22Q6V702 233 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 GCNT7Q6ZNI0 430 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 Q6ZVL8 140 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 TP53I13Q8NBR0 393 aaPredicted RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 KIF18AQ8NI77 898 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 BLOC1S5Q8TDH9 187 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 TCEAL3Q969E4 200 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 TRIM51Q9BSJ1 452 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 FSCN3Q9NQT6 498 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 FEZ2Q9UHY8 353 aaPredicted RBP13.21□□□□□ -0.29
GTF3A-209ENST00000640289 CD84Q9UIB8 345 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 MRFAP1Q9Y605 127 aa13.21□□□□□ -0.29
GTF3A-209ENST00000640289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.2□□□□□ -0.3
GTF3A-209ENST00000640289 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 A0A1W2PR77 199 aa13.2□□□□□ -0.3
GTF3A-209ENST00000640289 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms