RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 TLN1Q9Y490 2541 aaKnown RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 PRSS38A1L453 326 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 NUDT21O43809 227 aaKnown RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 CPNE6O95741 557 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 CYP1A1P04798 512 aaPredicted RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 PNLIPP16233 465 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 CHRNB2P17787 502 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 MPSTP25325 297 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 CD82P27701 267 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 RGRP47804 291 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 KLK7P49862 253 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 TPI1P60174 286 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 POLR2FP61218 127 aaKnown RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 SRSF1Q07955 248 aaKnown RBP eCLIP15.06■□□□□ 0
SYNE2-228ENST00000639659 RALGDSQ12967 914 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 BORAQ6PGQ7 559 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 WDR59Q6PJI9 974 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 OGFOD3Q6PK18 319 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 SRLQ86TD4 932 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 ZNF677Q86XU0 584 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 DTX1Q86Y01 620 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 ZDHHC1Q8WTX9 485 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 CENPIQ92674 756 aaPredicted RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 ZNF641Q96N77 438 aaPredicted RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 CINPQ9BW66 212 aaPredicted RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 FAM207AQ9NSI2 230 aaPredicted RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 GPATCH2LQ9NWQ4 482 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 GEMIN8Q9NWZ8 242 aaKnown RBP15.06■□□□□ 0
SYNE2-228ENST00000639659 SDK2Q58EX2 2172 aa15.06■□□□□ 0
SYNE2-228ENST00000639659 ARHGEF17Q96PE2 2063 aaPredicted RBP15.05■□□□□ 0
SYNE2-228ENST00000639659 ANKRD62A6NC57 917 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 B4GAT1O43505 415 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 PALMO75781 387 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 AK4P27144 223 aaPredicted RBP15.05■□□□□ -0
SYNE2-228ENST00000639659 GNPDA1P46926 289 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 POLE2P56282 527 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 B4GALNT1Q00973 533 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 BCL2L1Q07817 233 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 ILF3Q12906 894 aaKnown RBP eCLIP15.05■□□□□ -0
SYNE2-228ENST00000639659 SYCP1Q15431 976 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 DPCR1Q3MIW9 517 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 NKAIN2Q5VXU1 208 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 DNAJC24Q6P3W2 148 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 SLC30A9Q6PML9 568 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 LIPIQ6XZB0 460 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 FAM129CQ86XR2 697 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 PELI3Q8N2H9 469 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 TSEN2Q8NCE0 465 aaKnown RBP15.05■□□□□ -0
SYNE2-228ENST00000639659 HCAR2Q8TDS4 363 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 PATE1Q8WXA2 126 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 ART4Q93070 314 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 MCEEQ96PE7 176 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 TUBGCP5Q96RT8 1024 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 SEMA3CQ99985 751 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 SP110Q9HB58 689 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 SPATS2LQ9NUQ6 558 aaKnown RBP15.05■□□□□ -0
SYNE2-228ENST00000639659 FZD10Q9ULW2 581 aa15.05■□□□□ -0
SYNE2-228ENST00000639659 DFFAO00273 331 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 FGF10O15520 208 aaPredicted RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 ECEL1O95672 775 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 LIFP15018 202 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 SOX5P35711 763 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 PAPOLAP51003 745 aaKnown RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 KCNAB2Q13303 367 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 AGERQ15109 404 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 TSR1Q2NL82 804 aaKnown RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 DOK6Q6PKX4 331 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 TRIM72Q6ZMU5 477 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 NRSN1Q8IZ57 195 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 UMODL1-AS1Q8N2C9 162 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 CCDC112Q8NEF3 446 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 ZNF564Q8TBZ8 553 aaPredicted RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 PDCD6IPQ8WUM4 868 aaKnown RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 NKD1Q969G9 470 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 NUS1Q96E22 293 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 PCMTD1Q96MG8 357 aaPredicted RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 TAAR9Q96RI9 348 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 PCDHB18PQ96TA0 734 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 GSDMCQ9BYG8 508 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 EPN3Q9H201 632 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 VPS16Q9H269 839 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 GANQ9H2C0 597 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 PDFQ9HBH1 243 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 SAMSN1Q9NSI8 373 aaKnown RBP15.04■□□□□ -0
SYNE2-228ENST00000639659 TAAR2Q9P1P5 351 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 ANKMY1Q9P2S6 941 aa15.04■□□□□ -0
SYNE2-228ENST00000639659 IGHV5-10-1A0A0J9YXX1 117 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 ARHGAP42A6NI28 874 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 TNFRSF10CO14798 259 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 ZW10O43264 779 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 DAPK3O43293 454 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 PRAMEF11O60813 436 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 CALB1P05937 261 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 PRKAR1AP10644 381 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 FGF3P11487 239 aaPredicted RBP15.03■□□□□ -0
SYNE2-228ENST00000639659 CCNB1P14635 433 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 DESP17661 470 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 CSTF2P33240 577 aaKnown RBP eCLIP15.03■□□□□ -0
SYNE2-228ENST00000639659 SCNN1BP51168 640 aa15.03■□□□□ -0
SYNE2-228ENST00000639659 PTP4A2Q12974 167 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms