RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 RWDD4Q6NW29 188 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 CRTC1Q6UUV9 634 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 RAB11FIP2Q7L804 512 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 PRICKLE2Q7Z3G6 844 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 B3GNT8Q7Z7M8 397 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 GKN2Q86XP6 184 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 CCNJLQ8IV13 435 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 RYBPQ8N488 228 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 FBXO39Q8N4B4 442 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 RTL3Q8N8U3 475 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 MLKLQ8NB16 471 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 GPR156Q8NFN8 814 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 ATL2Q8NHH9 583 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 HCAR2Q8TDS4 363 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 CENPIQ92674 756 aaPredicted RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 SGF29Q96ES7 293 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 PDXPQ96GD0 296 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 KLHL32Q96NJ5 620 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 GFM1Q96RP9 751 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 RBM15Q96T37 977 aaKnown RBP eCLIP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 CPEB1Q9BZB8 566 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 EDEM3Q9BZQ6 932 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 B3GNT4Q9C0J1 378 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 PDCL3Q9H2J4 239 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 NDST4Q9H3R1 872 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 SYNDIG1Q9H7V2 258 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 EPB41L5Q9HCM4 733 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 MBNL1Q9NR56 388 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 STARD5Q9NSY2 213 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 NDFIP2Q9NV92 336 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 DNAI1Q9UI46 699 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 NOCTQ9UK39 431 aaKnown RBP5.54□□□□□ -1.52
PDE4D-229ENST00000638939 APPL1Q9UKG1 709 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 DAAM1Q9Y4D1 1078 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 FHOD1Q9Y613 1164 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 ACTL7AQ9Y615 435 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 DGKBQ9Y6T7 804 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 UNC79Q9P2D8 2635 aa5.54□□□□□ -1.52
PDE4D-229ENST00000638939 A0A1W2PQC6 194 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 A0A1W2PQM1 296 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CFAP69A5D8W1 941 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 WASH4PA8MWX3 477 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FAM72CH0Y354 149 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CASC3O15234 703 aaKnown RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FGF10O15520 208 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ARHGAP6O43182 974 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 EFSO43281 561 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 MMP20O60882 483 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CYP1A1P04798 512 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 MMEP08473 750 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 PLEKP08567 350 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 JMJD7P0C870 316 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 UCHL3P15374 230 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 GLB1P16278 677 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CES1P23141 567 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 HTR1BP28222 390 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 HTR7P34969 479 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ADRA1BP35368 520 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 AIF1P55008 147 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 HDAC4P56524 1084 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 YBEYP58557 167 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ATP11AP98196 1134 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CDR2Q01850 454 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ZFP36L1Q07352 338 aaKnown RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 MTM1Q13496 603 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 SERINC3Q13530 473 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 C1orf61Q13536 156 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 BECN1Q14457 450 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 LRRC14Q15048 493 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CLPPQ16740 277 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CDO1Q16878 200 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 C15orf59Q2T9L4 293 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 WSCD2Q2TBF2 565 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 LINC00303Q3SY05 128 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CCDC14Q49A88 953 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 TMEM52BQ4KMG9 183 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 VWA3BQ502W6 1294 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 C2CD6Q53TS8 623 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ATXN7L2Q5T6C5 722 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FAM72AQ5TYM5 149 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FAM72DQ6L9T8 149 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ERAP2Q6P179 960 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FOXR1Q6PIV2 292 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FIGNL1Q6PIW4 674 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 BRAT1Q6PJG6 821 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 TRIM72Q6ZMU5 477 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 LYSMD3Q7Z3D4 306 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 SPRED1Q7Z699 444 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 FAM72BQ86X60 149 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 DTX1Q86Y01 620 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 DNAAF5Q86Y56 855 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 SPNS2Q8IVW8 549 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 SLITRK4Q8IW52 837 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 CCDC185Q8N715 623 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 EMC1Q8N766 993 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 EXD3Q8N9H8 876 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 RNF166Q96A37 237 aaPredicted RBP5.53□□□□□ -1.52
PDE4D-229ENST00000638939 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
PDE4D-229ENST00000638939 ZNF641Q96N77 438 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms