RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 MCOLN3Q8TDD5 553 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 LINGO1Q96FE5 620 aa16.69■□□□□ 0.26
SCARB2-210ENST00000638567 FAM124BQ9H5Z6 455 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-210ENST00000638567 TBKBP1A7MCY6 615 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 ARIH2O95376 493 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 OR4Q2P0C623 313 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 DGKAP23743 735 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 ACSM2AQ08AH3 577 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 FAM187BQ17R55 369 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 PITRM1Q5JRX3 1037 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 ACSM2BQ68CK6 577 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 FRMD7Q6ZUT3 714 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 HEATR4Q86WZ0 1026 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 TTLL13PA6NNM8 815 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 PPEF2O14830 753 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 FESP07332 822 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 WEE1P30291 646 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 ADSLP30566 484 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-210ENST00000638567 DGUOKQ16854 277 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 MON1AQ86VX9 555 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 SYT12Q8IV01 421 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 OR8H2Q8N162 312 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 OR7A2PQ8NGA2 310 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-210ENST00000638567 CST1P01037 141 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 LPOP22079 712 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-210ENST00000638567 THOP1P52888 689 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 PERM1Q5SV97 790 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 SYTL1Q8IYJ3 562 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 SIGLEC10Q96LC7 697 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 STARD7Q9NQZ5 370 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 DUSP12Q9UNI6 340 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 MYH11P35749 1972 aa16.68■□□□□ 0.26
SCARB2-210ENST00000638567 HOXA2O43364 376 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CYP2A7P20853 494 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CHRNA4P43681 627 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 DSC2Q02487 901 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 MTA1Q13330 715 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TREML1Q86YW5 311 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PPP3R2Q96LZ3 170 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 BCO2Q9BYV7 579 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 REEP1Q9H902 201 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 ANXA6P08133 673 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 EPB42P16452 691 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 XRCC1P18887 633 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CCNCP24863 283 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 IDH2P48735 452 aaKnown RBP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CNTN1Q12860 1018 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CPSF6Q16630 551 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 OLFML1Q6UWY5 402 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CFAP52Q8N1V2 620 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TWIST2Q8WVJ9 160 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 SEPT8Q92599 483 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PCDHAC1Q9H158 963 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CNTN6Q9UQ52 1028 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 MYH7P12883 1935 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 BBIP1A8MTZ0 92 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CCNA2P20248 432 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 ITGAXP20702 1163 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PRKCHP24723 683 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 MRPL28Q13084 256 aaKnown RBP16.67■□□□□ 0.26
SCARB2-210ENST00000638567 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 REP15Q6BDI9 236 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 KIAA0408Q6ZU52 694 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 SLC9A7Q96T83 725 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 DNAJB4Q9UDY4 337 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 A0A1W2PQH9 124 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CCDC189A1A4V9 331 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 ANXA5P08758 320 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TYMPP19971 482 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CLCNKBP51801 687 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 OLIG2Q13516 323 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 CNPY1Q3B7I2 92 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PAOXQ6QHF9 649 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TBC1D21Q8IYX1 336 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 PQLC3Q8N755 202 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TMEM159Q96B96 161 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 RAD21L1Q9H4I0 556 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 MIEF1Q9NQG6 463 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 GALNT8Q9NY28 637 aa16.67■□□□□ 0.26
SCARB2-210ENST00000638567 TLR5O60602 858 aa16.66■□□□□ 0.26
SCARB2-210ENST00000638567 IFNA14P01570 189 aa16.66■□□□□ 0.26
SCARB2-210ENST00000638567 URODP06132 367 aa16.66■□□□□ 0.26
SCARB2-210ENST00000638567 PIK3CGP48736 1102 aa16.66■□□□□ 0.26
SCARB2-210ENST00000638567 GLUD2P49448 558 aa16.66■□□□□ 0.26
SCARB2-210ENST00000638567 NRG1Q02297 640 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-210ENST00000638567 CAMK2GQ13555 558 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-210ENST00000638567 NR1D2Q14995 579 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms