RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NR5A2O00482 541 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TPST1O60507 370 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 GFAPP14136 432 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 KCNA5P22460 613 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TKTP29401 623 aaKnown RBP14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 CLCN5P51795 746 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TRAF2Q12933 501 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 NR1D2Q14995 579 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 CYBRD1Q53TN4 286 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 OGFOD2Q6N063 350 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 USP51Q70EK9 711 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 SAMD7Q7Z3H4 446 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 CLYBLQ8N0X4 340 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 MIER2Q8N344 545 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 B3GALNT2Q8NCR0 500 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 FAM110BQ8TC76 370 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 RAB2BQ8WUD1 216 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 DPF3Q92784 378 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 L3HYPDHQ96EM0 354 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 PGAP3Q96FM1 320 aaPredicted RBP14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ABHD8Q96I13 439 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 FCRL5Q96RD9 977 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 DOLKQ9UPQ8 538 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ERGIC3Q9Y282 383 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TMX2-CTNND1H3BSU7 103 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 PIRO00625 290 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ARPC2O15144 300 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 F9P00740 461 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ALDH2P05091 517 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 CD247P20963 164 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 RFC2P35250 354 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 GEMP55040 296 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 NEDD8Q15843 81 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 NEPROQ6NW34 567 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ZNF773Q6PK81 442 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 SFRP1Q8N474 314 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 PAPD5Q8NDF8 572 aaKnown RBP14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 COPS5Q92905 334 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 NEURL2Q9BR09 285 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 EGFL7Q9UHF1 273 aa14.85□□□□□ -0.03
CACNA1A-220ENST00000635988 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 MATN4O95460 622 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 ARSAP15289 507 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 HALP42357 657 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 ATP1A4Q13733 1029 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 SLC14A2Q15849 920 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 CYP51A1Q16850 503 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 AASDHQ4L235 1098 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 SLC27A1Q6PCB7 646 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 OTOP3Q7RTS5 596 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 RNF135Q8IUD6 432 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 MICALL2Q8IY33 904 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 TSPEARQ8WU66 669 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 TANKQ92844 425 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 SLC35B4Q969S0 331 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 MAGED4Q96JG8 741 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 OLFM1Q99784 485 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 TRIM54Q9BYV2 358 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 GPN2Q9H9Y4 310 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 TREX1Q9NSU2 369 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 RIC8BQ9NVN3 520 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 GMPR2Q9P2T1 348 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 NRP1O14786 923 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 XPOTO43592 962 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 PEX10O60683 326 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 HUS1O60921 280 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 LDLRP01130 860 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 ALDOCP09972 364 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 MBL2P11226 248 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 SLC26A3P40879 764 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 LAMC2Q13753 1193 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 CYHR1Q6ZMK1 362 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 FRA10AC1Q70Z53 315 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 FBXO16Q8IX29 292 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 CPNE9Q8IYJ1 553 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 OFCC1Q8IZS5 231 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 SNX31Q8N9S9 440 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 IPMKQ8NFU5 416 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 OSCP1Q8WVF1 389 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 PHF21BQ96EK2 531 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 CXCL16Q9H2A7 254 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 AKTIPQ9H8T0 292 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 IL1RL2Q9HB29 575 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 ZFYVE28Q9HCC9 887 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 MAGEE1Q9HCI5 957 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 GMIPQ9P107 970 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 IFT80Q9P2H3 777 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 PSME2Q9UL46 239 aa14.84□□□□□ -0.03
CACNA1A-220ENST00000635988 BRWD3Q6RI45 1802 aa14.83□□□□□ -0.03
CACNA1A-220ENST00000635988 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 KPNA4O00629 521 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 ATP6AP2O75787 350 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CLPXO76031 633 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SEC14L2O76054 403 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 SUPT7LO94864 414 aa14.83□□□□□ -0.04
CACNA1A-220ENST00000635988 CLIC3O95833 236 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms