RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PFKPQ01813 784 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 CYLC2Q14093 348 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 DBN1Q16643 649 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 AP5B1Q2VPB7 878 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 C18orf21Q32NC0 220 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 IYDQ6PHW0 289 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 OR4L1Q8NH43 312 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 CMTM5Q96DZ9 223 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 LRGUKQ96M69 825 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 PCDHAC1Q9H158 963 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 HPS4Q9NQG7 708 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 SEPT3Q9UH03 358 aa7.53□□□□□ -1.2
PKP4-217ENST00000628904 NUP214P35658 2090 aaPredicted RBP7.53□□□□□ -1.2
PKP4-217ENST00000628904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.52□□□□□ -1.2
PKP4-217ENST00000628904 MAGEB16A2A368 324 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 CDC7O00311 574 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 INPPL1O15357 1258 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 SH3BP5O60239 455 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 SMNDC1O75940 238 aaKnown RBP eCLIP7.52□□□□□ -1.22e-7■■□□□ 13.3
PKP4-217ENST00000628904 GRK2P25098 689 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 LACTB2Q53H82 288 aaPredicted RBP7.52□□□□□ -1.2
PKP4-217ENST00000628904 MBLAC2Q68D91 279 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 RELL1Q8IUW5 271 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 LMNTD1Q8N9Z9 388 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.2
PKP4-217ENST00000628904 CALML6Q8TD86 181 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 NUDT8Q8WV74 236 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 UROC1Q96N76 676 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 KCNK13Q9HB14 408 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 CASS4Q9NQ75 786 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 ABCB8Q9NUT2 735 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 EURLQ9NYK6 297 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 YIPF1Q9Y548 306 aa7.52□□□□□ -1.2
PKP4-217ENST00000628904 UBDO15205 165 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 KLKB1P03952 638 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 MLNP12872 115 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 ARRB2P32121 409 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CTNNB1P35222 781 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TM4SF4P48230 202 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 HNRNPDQ14103 355 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 IMPG1Q17R60 797 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TNFAIP8L3Q5GJ75 292 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TMTC4Q5T4D3 741 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 ZNF648Q5T619 568 aaPredicted RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 EMC10Q5UCC4 262 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TMEM154Q6P9G4 183 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SZRD1Q7Z422 152 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 ZBTB46Q86UZ6 589 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TMPRSS6Q8IU80 811 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 FBXO39Q8N4B4 442 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SEPHS2Q99611 448 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 BBS2Q9BXC9 721 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SLC25A51Q9H1U9 297 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 RNPEPL1Q9HAU8 725 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SAR1AQ9NR31 198 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 ARHGAP26Q9UNA1 814 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SNX13Q9Y5W8 968 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 OR2AG2A6NM03 316 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SMAD6O43541 496 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 TBX10O75333 385 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TMCC1O94876 653 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 KLHL2O95198 593 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 LTA4HP09960 611 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 SLC35E2BP0CK96 405 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 COX4I1P13073 169 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CNTFP26441 200 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CDKN2DP55273 166 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 AP2B1P63010 937 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 PPP1R8Q12972 351 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 GPR17Q13304 367 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 TCTN1Q2MV58 587 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CCDC153Q494R4 210 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 THEMIS2Q5TEJ8 643 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 PAOXQ6QHF9 649 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 AMIGO2Q86SJ2 522 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 APCDD1Q8J025 514 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 MZB1Q8WU39 189 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 HAPLN3Q96S86 360 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 MRPL1Q9BYD6 325 aaKnown RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 CCDC134Q9H6E4 229 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SLC7A8Q9UHI5 535 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SLCO3A1Q9UIG8 710 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CDH22Q9UJ99 828 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 SPO11Q9Y5K1 396 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 VCANP13611 3396 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.52□□□□□ -1.21
PKP4-217ENST00000628904 FAM149AA5PLN7 773 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 H3BMM5 538 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 HDAC3O15379 428 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 AKAP10O43572 662 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 CYBBP04839 570 aa7.52□□□□□ -1.21
PKP4-217ENST00000628904 MPOP05164 745 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms