RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PGLSO95336 258 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 PIRTP0C851 137 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 PAMP19021 973 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 CA4P22748 312 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 GDI1P31150 447 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 MAPK8P45983 427 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 KDSRQ06136 332 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 BCL2L1Q07817 233 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 NAB1Q13506 487 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 CNGA3Q16281 694 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 MYLK3Q32MK0 819 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 HSP90AA5PQ58FG0 334 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 CARD16Q5EG05 197 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARMC12Q5T9G4 340 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 TEDDM1Q5T9Z0 273 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 EMC10Q5UCC4 262 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 PDPK2PQ6A1A2 396 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 KIAA0930Q6ICG6 404 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 NLRP9Q7RTR0 991 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 CAMK1DQ8IU85 385 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 SRRM1Q8IYB3 904 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARFGAP2Q8N6H7 521 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 PCDH20Q8N6Y1 951 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 BRSK1Q8TDC3 778 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 MYO19Q96H55 970 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 MRGPRX3Q96LB0 322 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 NECTIN4Q96NY8 510 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 SMIM14Q96QK8 99 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 AGAP2Q99490 1192 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 RPP25Q9BUL9 199 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ADGRE3Q9BY15 652 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRABDQ9H4I3 376 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ZFATQ9P243 1243 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 CD207Q9UJ71 328 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 ADAM21Q9UKJ8 722 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 SLC27A6Q9Y2P4 619 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 USP15Q9Y4E8 981 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 KCTD3Q9Y597 815 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 SPO11Q9Y5K1 396 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 PSAT1Q9Y617 370 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 DENND4AQ7Z401 1863 aa9.98□□□□□ -0.81
SOX2-OT-244ENST00000627738 TTC34A8MYJ7 566 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ANKRD66B4E2M5 251 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRIM49D1C9J1S8 452 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 PRRT4C9JH25 899 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 H3BQ06 376 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRAFD1O14545 582 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 BUD23O43709 281 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 KRT37O76014 449 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 KRT38O76015 456 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 VAPBO95292 243 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 PAPSS2O95340 614 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ASLP04424 464 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ATP5BP06576 529 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SRPRAP08240 638 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 F7P08709 466 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 DLDP09622 509 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 BRAFP15056 766 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SP100P23497 879 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARNTP27540 789 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SLC8A1P32418 973 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 GJA4P35212 333 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 NNMTP40261 264 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARCN1P48444 511 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SERPINB9P50453 376 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 CCNHP51946 323 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 EPHB1P54762 984 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 MLLT1Q03111 559 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 LAMB3Q13751 1172 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 BMPR2Q13873 1038 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 PTPRCAPQ14761 206 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 LCE2CQ5TA81 110 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 LGSNQ5TDP6 509 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 PACS1Q6VY07 963 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 DPY19L3Q6ZPD9 716 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 Q6ZVU0 165 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 MICALCLQ6ZW33 695 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 C4orf33Q8N1A6 199 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 PAF1Q8N7H5 531 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 MDGA1Q8NFP4 955 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 OR13J1Q8NGT2 312 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 MDM1Q8TC05 714 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SUSD6Q92537 303 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 NXPE3Q969Y0 559 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 GAS2L1Q99501 681 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 KLF6Q99612 283 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 CPNE1Q99829 537 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 TRMT61BQ9BVS5 477 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ATP13A3Q9H7F0 1226 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 KCNK9Q9NPC2 374 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ELOVL2Q9NXB9 296 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 GTSE1Q9NYZ3 720 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 SENP1Q9P0U3 644 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 TXNDC16Q9P2K2 825 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms