RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ARHGEF7Q14155 803 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 FZD2Q14332 565 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 IHHQ14623 411 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 INPP5AQ14642 412 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-208ENST00000626828 B4GALNT4Q76KP1 1039 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 ZC3H18Q86VM9 953 aaKnown RBP16.79■□□□□ 0.28
UBE3D-208ENST00000626828 ALG3Q92685 438 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 TEKT5Q96M29 485 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 VAT1Q99536 393 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 TDRD1Q9BXT4 1180 aaKnown RBP16.79■□□□□ 0.28
UBE3D-208ENST00000626828 SLC25A51Q9H1U9 297 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 PCDH9Q9HC56 1237 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 DNAJC28Q9NX36 388 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
UBE3D-208ENST00000626828 A0A0J9YYE9 177 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 NEMP2A6NFY4 417 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 PSMD11O00231 422 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 TNFSF14O43557 240 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 HEXIM1O94992 359 aaKnown RBP16.78■□□□□ 0.28
UBE3D-208ENST00000626828 PRLP01236 227 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 TRBC1P01850 177 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 CSF2P04141 144 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 MMP2P08253 660 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 CTPS1P17812 591 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 DGKAP23743 735 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 HNF1BP35680 557 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 SKOR1P84550 965 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 MTM1Q13496 603 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 IRF4Q15306 451 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 ZNF662Q6ZS27 426 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 PARGQ86W56 976 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 BAHD1Q8TBE0 780 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-208ENST00000626828 IMP4Q96G21 291 aaKnown RBP16.78■□□□□ 0.28
UBE3D-208ENST00000626828 COQ10AQ96MF6 247 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 FERMT1Q9BQL6 677 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 APOOQ9BUR5 198 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 ADGRE3Q9BY15 652 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 GLOD4Q9HC38 313 aa16.78■□□□□ 0.28
UBE3D-208ENST00000626828 APOBEC2Q9Y235 224 aaKnown RBP16.78■□□□□ 0.28
UBE3D-208ENST00000626828 TPRP12270 2363 aaKnown RBP16.78■□□□□ 0.28
UBE3D-208ENST00000626828 ANKRD66B4E2M5 251 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 H3BM21 787 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 H7C0C1 242 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 PIAS2O75928 621 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 TRIM16O95361 564 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 LDOC1O95751 146 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-208ENST00000626828 FTCDO95954 541 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 CCDC175P0C221 793 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 PTPN3P26045 913 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 HTR1BP28222 390 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 ATP5OP48047 213 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 SLC14A2Q15849 920 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 CNGA3Q16281 694 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 ZNF542PQ5EBM4 170 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 PID1Q7Z2X4 250 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 KANSL1Q7Z3B3 1105 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 SLC25A45Q8N413 288 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 EID2Q8N6I1 236 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 ATL2Q8NHH9 583 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 BTN2A2Q8WVV5 523 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 HTR3CQ8WXA8 447 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 HAUS1Q96CS2 278 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 CEP41Q9BYV8 373 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 TRHDEQ9UKU6 1024 aa16.77■□□□□ 0.28
UBE3D-208ENST00000626828 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 NPIPB15A6NHN6 443 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 ALPIP09923 528 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 NME1P15531 152 aaKnown RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 ZNF30P17039 623 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 JUNDP17535 347 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 GM2AP17900 193 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 PMLP29590 882 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 TRIM23P36406 574 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 WASHC5Q12768 1159 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 EIF2B5Q13144 721 aaKnown RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 HS1BP3Q53T59 392 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 DENND2CQ68D51 928 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 CCDC70Q6NSX1 233 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 PNCKQ6P2M8 343 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 MACC1Q6ZN28 852 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 NLRP8Q86W28 1048 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 RAVER1Q8IY67 606 aaKnown RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 ACTL9Q8TC94 416 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 RBM15Q96T37 977 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 MLPHQ9BV36 600 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 PACSIN2Q9UNF0 486 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-208ENST00000626828 CSNK1G3Q9Y6M4 447 aa16.76■□□□□ 0.27
UBE3D-208ENST00000626828 GOLGA8CPA6NN73 597 aa16.75■□□□□ 0.27
UBE3D-208ENST00000626828 PDE2AO00408 941 aaPredicted RBP16.75■□□□□ 0.27
UBE3D-208ENST00000626828 SDC3O75056 442 aa16.75■□□□□ 0.27
UBE3D-208ENST00000626828 ZNF189O75820 626 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms