RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 VAPBO95292 243 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 SERPINB5P36952 375 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 PPARGP37231 505 aaPredicted RBP17.55■□□□□ 0.4
FAM3A-222ENST00000621967 AVPR1AP37288 418 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 GLRBP48167 497 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 PGGT1BP53609 377 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 HERC3Q15034 1050 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 TSTD2Q5T7W7 516 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 ESRP1Q6NXG1 681 aaKnown RBP17.55■□□□□ 0.4
FAM3A-222ENST00000621967 RTL10Q7L3V2 364 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 PHC3Q8NDX5 983 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 SCAMP5Q8TAC9 235 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 SCYL1Q96KG9 808 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 SIK2Q9H0K1 926 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 FBXO44Q9H4M3 255 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 ABCC13Q9NSE7 274 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 MTCH2Q9Y6C9 303 aa17.55■□□□□ 0.4
FAM3A-222ENST00000621967 MTCL1Q9Y4B5 1905 aaKnown RBP17.54■□□□□ 0.4
FAM3A-222ENST00000621967 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 CD1EP15812 388 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 STMN1P16949 149 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 SAT1P21673 171 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 EPHA3P29320 983 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 DLG1Q12959 904 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 CTBP1Q13363 440 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 PPP2R5DQ14738 602 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 HABP4Q5JVS0 413 aaKnown RBP17.54■□□□□ 0.4
FAM3A-222ENST00000621967 ARMC3Q5W041 872 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 KIAA0930Q6ICG6 404 aaPredicted RBP17.54■□□□□ 0.4
FAM3A-222ENST00000621967 C16orf89Q6UX73 402 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 ACAD11Q709F0 780 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 ITIH5Q86UX2 942 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 SNX32Q86XE0 403 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 C2CD4AQ8NCU7 369 aaPredicted RBP17.54■□□□□ 0.4
FAM3A-222ENST00000621967 CASP10Q92851 521 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 TRAPPC9Q96Q05 1148 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 KLHL4Q9C0H6 718 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
FAM3A-222ENST00000621967 PRRC2BQ5JSZ5 2229 aaKnown RBP17.54■□□□□ 0.4
FAM3A-222ENST00000621967 NEMP1O14524 444 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NPHS1O60500 1241 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 RFPL2O75678 378 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SNUPNO95149 360 aaKnown RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 HLA-DQB2P05538 268 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 PIM1P11309 404 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SLC1A2P43004 574 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 RPL26P61254 145 aaKnown RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NRG1Q02297 640 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 HYAL1Q12794 435 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 MSLNQ13421 630 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 ADGRE1Q14246 886 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SFT2D3Q587I9 215 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 RNF220Q5VTB9 566 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 TIGD7Q6NT04 549 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 RANBP10Q6VN20 620 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 EFCAB3Q8N7B9 438 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NXNL1Q96CM4 212 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NUF2Q9BZD4 464 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SLC24A3Q9HC58 644 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 ACSS2Q9NR19 701 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SLC2A6Q9UGQ3 507 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 CDYLQ9Y232 598 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 CCL16O15467 120 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 PEX1O43933 1283 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 FESP07332 822 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 UBTFL6P0CB48 400 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 YWHAQP27348 245 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 CCR1P32246 355 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NUDT2P50583 147 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 USP46P62068 366 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 ZNF460Q14592 562 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 LPCAT4Q643R3 524 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 GPR153Q6NV75 609 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 KDM1BQ8NB78 822 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 KYQ8NBH2 561 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 MAELQ96JY0 434 aaKnown RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 MRGPRX2Q96LB1 330 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 SERPINI1Q99574 410 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 MRPL46Q9H2W6 279 aaKnown RBP17.53■□□□□ 0.4
FAM3A-222ENST00000621967 NDFIP2Q9NV92 336 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
FAM3A-222ENST00000621967 BPTFQ12830 3046 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 A0A087X1B8 175 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 JUNP05412 331 aaKnown RBP17.52■□□□□ 0.4
FAM3A-222ENST00000621967 PAMP19021 973 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 PEX2P28328 305 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 HOXA9P31269 272 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 DNAJB13P59910 316 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 IRX1P78414 480 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-222ENST00000621967 FOXB2Q5VYV0 432 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 LRRC49Q8IUZ0 686 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 DSELQ8IZU8 1212 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 EFHBQ8N7U6 833 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 VN1R2Q8NFZ6 395 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 FBXO32Q969P5 355 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 PSMG2Q969U7 264 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 FCRL2Q96LA5 508 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-222ENST00000621967 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-222ENST00000621967 MRPL57Q9BQC6 102 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms