RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TOGARAM2Q6ZUX3 1019 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 SCN4BQ8IWT1 228 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 CEP76Q8TAP6 659 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 CPT1BQ92523 772 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 KCNJ9Q92806 393 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 ZSCAN31Q96LW9 406 aaPredicted RBP5.29□□□□□ -1.56
VPS29-212ENST00000621131 FRG2BQ96QU4 278 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 LSG1Q9H089 658 aaKnown RBP5.29□□□□□ -1.56
VPS29-212ENST00000621131 VPS33BQ9H267 617 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 CDH22Q9UJ99 828 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 OSGIN2Q9Y236 505 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 MAST2Q6P0Q8 1798 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 MYH13Q9UKX3 1938 aa5.29□□□□□ -1.56
VPS29-212ENST00000621131 DOCK2Q92608 1830 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 A0A0D9SFI3 127 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 TMEM247A6NEH6 219 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 FAM90A20PA6NIJ5 464 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 HNRNPRO43390 633 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 SKAP2O75563 359 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 SOX30O94993 753 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 CHN1P15882 459 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 ZNF12P17014 697 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 CASTP20810 708 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 SERPINA4P29622 427 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 AVPR2P30518 371 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 ART1P52961 327 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 RPS8P62241 208 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 RPL36AP83881 106 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 KIF5AQ12840 1032 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 GRAPQ13588 217 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 ZNF284Q2VY69 593 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 SYTL3Q4VX76 610 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 LIN54Q6MZP7 749 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 BLOC1S2Q6QNY1 142 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 KLHL17Q6TDP4 642 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 CCDC117Q8IWD4 279 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 ZDHHC23Q8IYP9 409 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 PTGR2Q8N8N7 351 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 ATG16L2Q8NAA4 619 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 GRAPLQ8TC17 118 aaPredicted RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 FAR1Q8WVX9 515 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 ABHD8Q96I13 439 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 JAKMIP1Q96N16 626 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 PDRG1Q9NUG6 133 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 NDUFAF4Q9P032 175 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 IL36RNQ9UBH0 155 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
VPS29-212ENST00000621131 TNRC6CQ9HCJ0 1690 aaKnown RBP5.28□□□□□ -1.56
VPS29-212ENST00000621131 COL6A3P12111 3177 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 SZT2Q5T011 3432 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 A0A1B0GUV1 79 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 KRT86O43790 486 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 IDH1O75874 414 aaKnown RBP5.27□□□□□ -1.57
VPS29-212ENST00000621131 SERPINB2P05120 415 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 SETSIPP0DME0 302 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 ADORA1P30542 326 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 THPOP40225 353 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TNFAIP2Q03169 654 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TRDNQ13061 729 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TRAF3Q13114 568 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 KRT81Q14533 505 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 IMMTQ16891 758 aaKnown RBP5.27□□□□□ -1.57
VPS29-212ENST00000621131 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 RINLQ6ZS11 566 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 RUFY3Q7L099 469 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 C16orf82Q7Z2V1 217 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 ARMC9Q7Z3E5 817 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TRIM74Q86UV6 250 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TRIM73Q86UV7 250 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 SPATA5Q8NB90 893 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 TMEM163Q8TC26 289 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 SLC35F5Q8WV83 523 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 DNASE2BQ8WZ79 361 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 DDX23Q9BUQ8 820 aaKnown RBP5.27□□□□□ -1.57
VPS29-212ENST00000621131 NACAP1Q9BZK3 213 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 KLQ9UEF7 1012 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 BAG5Q9UL15 447 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 KIF3AQ9Y496 699 aa5.27□□□□□ -1.57
VPS29-212ENST00000621131 PDS5AQ29RF7 1337 aaKnown RBP5.26□□□□□ -1.57
VPS29-212ENST00000621131 C17orf102A2RUQ5 167 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 BTBD18B2RXH4 712 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 DDAH2O95865 285 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 FCGR1AP12314 374 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 ENO3P13929 434 aaPredicted RBP5.26□□□□□ -1.57
VPS29-212ENST00000621131 GAS1P54826 345 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 CDH12P55289 794 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 SEC61A1P61619 476 aaKnown RBP5.26□□□□□ -1.57
VPS29-212ENST00000621131 TRAF2Q12933 501 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 NECTIN1Q15223 517 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 GXYLT1Q4G148 440 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 SLC9C2Q5TAH2 1124 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 PRR5LQ6MZQ0 368 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 AADACL2Q6P093 401 aa5.26□□□□□ -1.57
VPS29-212ENST00000621131 NOL8Q76FK4 1167 aaKnown RBP5.26□□□□□ -1.57
VPS29-212ENST00000621131 CUZD1Q86UP6 607 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms