RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SNTG2Q9NY99 539 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 KIF17Q9P2E2 1029 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 LOXHD1Q8IVV2 1947 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 COL2A1P02458 1487 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 A8MU76 341 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 MYO1GB0I1T2 1018 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 NRP2O60462 931 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 CABYRO75952 493 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SRP72O76094 671 aaKnown RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SNRPB2P08579 225 aaKnown RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 MLNP12872 115 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 PTPN3P26045 913 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 PCSK1P29120 753 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 OXTRP30559 389 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 GRM5P41594 1212 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 HALP42357 657 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 BCAT1P54687 386 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 NHSL2Q5HYW2 709 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF470Q6ECI4 717 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SLC27A1Q6PCB7 646 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SCIMPQ6UWF3 145 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 Q6ZNX1 250 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM110Q86TL2 294 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ZC3HC1Q86WB0 502 aaKnown RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 PPTC7Q8NI37 304 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SGCDQ92629 289 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 TUBGCP3Q96CW5 907 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ZBED3Q96IU2 234 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 RMI1Q9H9A7 625 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 CDHR5Q9HBB8 845 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 EML4Q9HC35 981 aaKnown RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 LTB4R2Q9NPC1 389 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 HPS4Q9NQG7 708 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SACM1LQ9NTJ5 587 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 TUBGCP4Q9UGJ1 667 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 PRG3Q9Y2Y8 225 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 MAGED1Q9Y5V3 778 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SPTLC1O15269 473 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 CA12O43570 354 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SNAP29O95721 258 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ELK4P28324 431 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ALDH3B2P48448 385 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 TXNL4AP83876 142 aaKnown RBP6.98□□□□□ -1.29
NEDD9-216ENST00000620854 UBE3AQ05086 875 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 MERTKQ12866 999 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 C4orf22Q6V702 233 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 CCDC81Q6ZN84 652 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 LYSMD3Q7Z3D4 306 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SLC15A4Q8N697 577 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SPPL2BQ8TCT7 592 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 ASIC4Q96FT7 647 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 FZD8Q9H461 694 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 CYP3A43Q9HB55 503 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 IGSF9Q9P2J2 1179 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 FADS3Q9Y5Q0 445 aa6.98□□□□□ -1.29
NEDD9-216ENST00000620854 SHROOM3Q8TF72 1996 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 NCF1BA6NI72 391 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 NCF1CA8MVU1 366 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SUPT3HB4E1H0 165 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PTGES3LE9PB15 166 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ADAM23O75077 832 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 NDUFS3O75489 264 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BEST1O76090 585 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TOMM70O94826 608 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PARNO95453 639 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 NCF1P14598 390 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PORP16435 677 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SLC7A1P30825 629 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CHRNA4P43681 627 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 APLP1P51693 650 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 RPL26P61254 145 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 MBTD1Q05BQ5 628 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 MAPK11Q15759 364 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ZBED5Q49AG3 693 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF789Q5FWF6 425 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 RBM20Q5T481 1227 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 C1QTNF12Q5T7M4 302 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BTLAQ7Z6A9 289 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CROCCP3Q8IVE0 287 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM151AQ8N4L1 468 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 DCBLD1Q8N8Z6 715 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TFAP2CQ92754 450 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 GFM2Q969S9 779 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 ZMAT2Q96NC0 199 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 RPF2Q9H7B2 306 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TXNRD2Q9NNW7 524 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 LAMA2P24043 3122 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 DHRS12A0PJE2 317 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 H3BMM5 538 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SMIM10L2AP0DMW4 78 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 SMIM10L2BP0DMW5 78 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BDNFP23560 247 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TRIM16LQ309B1 348 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM214Q6NUQ4 689 aaKnown RBP6.97□□□□□ -1.29
NEDD9-216ENST00000620854 BORAQ6PGQ7 559 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 DCDC5Q6ZRR9 648 aa6.97□□□□□ -1.29
NEDD9-216ENST00000620854 PIWIL3Q7Z3Z3 882 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms