RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 TLR9Q9NR96 1032 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 EBF1Q9UH73 591 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 SNX13Q9Y5W8 968 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 F2P00734 622 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 HLA-DQB2P05538 268 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 USP17L7P0C7H9 530 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 FGFR3P22607 806 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 YWHAQP27348 245 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 CLCN5P51795 746 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 COG7P83436 770 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 FOXM1Q08050 763 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
SKP2-209ENST00000620197 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 ELMO2Q96JJ3 720 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 HOPXQ9BPY8 73 aaPredicted RBP13.13□□□□□ -0.31
SKP2-209ENST00000620197 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
SKP2-209ENST00000620197 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 IPPQ9Y573 584 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
SKP2-209ENST00000620197 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 NCAM1P13591 858 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CKMT2P17540 419 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CHRNA4P43681 627 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 NME5P56597 212 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 SNX17Q15036 470 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 KANK2Q63ZY3 851 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ZNF470Q6ECI4 717 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 RPS27LQ71UM5 84 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 SLC22A9Q8IVM8 553 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 TRPV6Q9H1D0 765 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 WDCPQ9H6R7 721 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CCDC167Q9P0B6 97 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 TIPRLO75663 272 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 MMP2P08253 660 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ACVR1Q04771 509 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 CILP2Q8IUL8 1156 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 SLC15A3Q8IY34 581 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 TANKQ92844 425 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 FICDQ9BVA6 458 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 SDR39U1Q9NRG7 319 aaPredicted RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 CMTM6Q9NX76 183 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ASPDHA6ND91 283 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 CPNE6O95741 557 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 RBP1P09455 135 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 RPL10P27635 214 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 SLC7A2P52569 658 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 GEMP55040 296 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CDKN2DP55273 166 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 HERVK_113P63132 956 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CYTH1Q15438 398 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 FAM83EQ2M2I3 478 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 RWDD4Q6NW29 188 aaKnown RBP13.12□□□□□ -0.31
SKP2-209ENST00000620197 PRMT9Q6P2P2 845 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ZNF683Q8IZ20 524 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 C19orf60Q96EN9 201 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 CD320Q9NPF0 282 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 ACTR3BQ9P1U1 418 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
SKP2-209ENST00000620197 MYBPHLA2RUH7 354 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 CAPN3P20807 821 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SLC6A2P23975 617 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
SKP2-209ENST00000620197 STT3AP46977 705 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 CDH15P55291 814 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SH3BP2P78314 561 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 GRSF1Q12849 480 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKP2-209ENST00000620197 AGAP9Q5VTM2 703 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 FAM171BQ6P995 826 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 TUBB1Q9H4B7 451 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
SKP2-209ENST00000620197 RPF2Q9H7B2 306 aaKnown RBP13.11□□□□□ -0.31
SKP2-209ENST00000620197 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
SKP2-209ENST00000620197 A0A087WXM4 84 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 HAS3O00219 553 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 NUP107P57740 925 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 MERTKQ12866 999 aa13.11□□□□□ -0.31
SKP2-209ENST00000620197 BNIP2Q12982 314 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms