RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PPIDQ08752 370 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 WASHC5Q12768 1159 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TFDP2Q14188 446 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LBRQ14739 615 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NOMO1Q15155 1222 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LPAL2Q16609 132 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 RSPO4Q2I0M5 234 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MYLK3Q32MK0 819 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SETMARQ53H47 684 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 LACTB2Q53H82 288 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TRIM61Q5EBN2 209 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TFDP3Q5H9I0 405 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CEP85LQ5SZL2 805 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PIP5KL1Q5T9C9 394 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 STPG1Q5TH74 334 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GKAP1Q5VSY0 366 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 AGBL4Q5VU57 503 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DUPD1Q68J44 220 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 KIAA1161Q6NSJ0 714 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DBX2Q6ZNG2 339 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TRMT10CQ7L0Y3 403 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GLRX5Q86SX6 157 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 FAM124AQ86V42 546 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TRIM69Q86WT6 500 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SLC13A5Q86YT5 568 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CAMK1DQ8IU85 385 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SLC41A1Q8IVJ1 513 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 BBS5Q8N3I7 341 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SDR16C5Q8N3Y7 309 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DEFB119Q8N690 84 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 EFCAB3Q8N7B9 438 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 OR2AP1Q8NGE2 309 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 C1orf216Q8TAB5 229 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SLC35B2Q8TB61 432 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ARRDC2Q8TBH0 407 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PIP4K2CQ8TBX8 421 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ACTL9Q8TC94 416 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GRIN3AQ8TCU5 1115 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GRK7Q8WTQ7 553 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ATG4AQ8WYN0 398 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PIGKQ92643 395 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GRAMD1AQ96CP6 724 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 HDAC11Q96DB2 347 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 RBM41Q96IZ5 413 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MS4A14Q96JA4 679 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF641Q96N77 438 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 QKIQ96PU8 341 aaKnown RBP eCLIP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PSKH2Q96QS6 385 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 TUBGCP5Q96RT8 1024 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CCT8L2Q96SF2 557 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 FMO2Q99518 471 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 IL12RB2Q99665 862 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CDC6Q99741 560 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 MGME1Q9BQP7 344 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GORASP1Q9BQQ3 440 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 HEPHQ9BQS7 1158 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CCDC77Q9BR77 488 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ORAI3Q9BRQ5 295 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 C1QTNF7Q9BXJ2 289 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NSRP1Q9H0G5 558 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NEUROG2Q9H2A3 272 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 C6orf106Q9H6K1 298 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SP110Q9HB58 689 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 USP29Q9HBJ7 922 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NOD2Q9HC29 1040 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PARD6AQ9NPB6 346 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 FBXL12Q9NXK8 326 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NCKIPSDQ9NZQ3 722 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 DKK3Q9UBP4 350 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 GGT7Q9UJ14 662 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 PLAAQ9Y263 795 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 EFR3BQ9Y2G0 817 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ATP8A1Q9Y2Q0 1164 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 NFS1Q9Y697 457 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 FAM208BQ5VWN6 2430 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 SMG1Q96Q15 3661 aaKnown RBP5.29□□□□□ -1.56
SHMT1-211ENST00000618902 IGF2RP11717 2491 aa5.29□□□□□ -1.56
SHMT1-211ENST00000618902 ARID1BQ8NFD5 2236 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 ZFHX4Q86UP3 3567 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 A0A0U1RQS6 177 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TSPAN11A1L157 253 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 MEI4A8MW99 385 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 F5H423 210 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PRAMEF26H0Y7S4 382 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 H0YHG0 523 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 APOC4-APOC2K7ER74 178 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 SMAPO00193 183 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 KPNA3O00505 521 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TRAFD1O14545 582 aaPredicted RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 FLRT2O43155 660 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TSPAN6O43657 245 aa5.28□□□□□ -1.56
SHMT1-211ENST00000618902 PLRG1O43660 514 aaKnown RBP5.28□□□□□ -1.56
SHMT1-211ENST00000618902 TCEA3O75764 348 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms