RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 DNAJB7Q7Z6W7 309 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 ARHGAP24Q8N264 748 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TTLL2Q9BWV7 592 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 NCKIPSDQ9NZQ3 722 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 FNIP2Q9P278 1114 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 SSX2IPQ9Y2D8 614 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 ATP6AP2A0A1C7CYW4 349 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 LRRC14BA6NHZ5 514 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 GRID2O43424 1007 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 BNIP3LO60238 219 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TBL1XO60907 577 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TBX10O75333 385 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 ATP6AP2O75787 350 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 BAG2O95816 211 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 LTA4HP09960 611 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 HDCP19113 662 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 FMO4P31512 558 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 CDH4P55283 916 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 ASPHQ12797 758 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 KLF10Q13118 480 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 TAF11Q15544 211 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 AGAP9Q5VTM2 703 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 GLT6D1Q7Z4J2 308 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 RNF148Q8N7C7 305 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 MRPL57Q9BQC6 102 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 MAGEH1Q9H213 219 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 DCLRE1BQ9H816 532 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 SEPT3Q9UH03 358 aa12.44□□□□□ -0.42
CIITA-212ENST00000618207 AFF4Q9UHB7 1163 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
CIITA-212ENST00000618207 A8MT66 165 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 H3BNC9 293 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CFLARO15519 480 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SLC7A4O43246 635 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CIB2O75838 187 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 TM7SF2O76062 418 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SUPT7LO94864 414 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 PSMG1O95456 288 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 ZXDBP98169 803 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 CLEC6AQ6EIG7 209 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 KLC3Q6P597 504 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 ZNF549Q6P9A3 640 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CCDC117Q8IWD4 279 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 MDGA1Q8NFP4 955 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 GIMAP7Q8NHV1 300 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 N4BP2L2Q92802 583 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 ZNF570Q96NI8 536 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SIKE1Q9BRV8 207 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CFHR5Q9BXR6 569 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 A8MX80 341 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 K7ERQ8 282 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 WFS1O76024 890 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SIX3O95343 332 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 FGF1P05230 155 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CSF2RAP15509 400 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 HLA-DPA1P20036 260 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CPOXP36551 454 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CLCN5P51795 746 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CYP4F8P98187 520 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 PRKAA1Q13131 559 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 VEPH1Q14D04 833 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 GEN1Q17RS7 908 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 ADGRF1Q5T601 910 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 FAM91A1Q658Y4 838 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 TPGS1Q6ZTW0 290 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SNX32Q86XE0 403 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 OR4L1Q8NH43 312 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 WFDC5Q8TCV5 224 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 CDKN2AIPNLQ96HQ2 116 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CHD7Q9P2D1 2997 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 RANBP2P49792 3224 aaKnown RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 A0A087X1B8 175 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 NCF1BA6NI72 391 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 NCF1CA8MVU1 366 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 PPP6CO00743 305 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 INSIG1O15503 277 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 CLDN11O75508 207 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 NDST3O95803 873 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 COL6A2P12110 1019 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 COX4I1P13073 169 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 NCF1P14598 390 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
CIITA-212ENST00000618207 ITGB8P26012 769 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 GKP32189 559 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 NUDT2P50583 147 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 SEMG2Q02383 582 aa12.43□□□□□ -0.42
CIITA-212ENST00000618207 TSNAXIP1Q2TAA8 658 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms