RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CALML6Q8TD86 181 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 HEXDCQ8WVB3 486 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 CCDC126Q96EE4 140 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 PPP1R36Q96LQ0 422 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 C1orf74Q96LT6 269 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 CATSPER2Q96P56 530 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 GBP5Q96PP8 586 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 CDRT15Q96T59 188 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 CLSTN3Q9BQT9 956 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 SLC25A51Q9H1U9 297 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 EFCAB1Q9HAE3 211 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 IGSF5Q9NSI5 407 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 COPG1Q9Y678 874 aaKnown RBP14.77□□□□□ -0.05
CDH1-213ENST00000612417 HEATR9A2RTY3 570 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 ENO4A6NNW6 628 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 SDHDO14521 159 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 PAPOLAP51003 745 aaKnown RBP14.76□□□□□ -0.05
CDH1-213ENST00000612417 PDCD2Q16342 344 aaPredicted RBP14.76□□□□□ -0.05
CDH1-213ENST00000612417 TECRLQ5HYJ1 363 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 RASIP1Q5U651 963 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 SLC30A9Q6PML9 568 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 TRIM67Q6ZTA4 783 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 PELI3Q8N2H9 469 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 CEP70Q8NHQ1 597 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 GABPB2Q8TAK5 448 aaPredicted RBP14.76□□□□□ -0.05
CDH1-213ENST00000612417 PIP4K2CQ8TBX8 421 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 DLG3Q92796 817 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 FAR2Q96K12 515 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 OMDQ99983 421 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 DDX50Q9BQ39 737 aaKnown RBP14.76□□□□□ -0.05
CDH1-213ENST00000612417 POMKQ9H5K3 350 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 RC3H2Q9HBD1 1191 aaKnown RBP14.76□□□□□ -0.05
CDH1-213ENST00000612417 HS3ST4Q9Y661 456 aa14.76□□□□□ -0.05
CDH1-213ENST00000612417 AP1G1O43747 822 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 PAPSS2O95340 614 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 TBX18O95935 607 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 PEX11BO96011 259 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 URODP06132 367 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ATF6P18850 670 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 EN2P19622 333 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 CA8P35219 290 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 LEPRP48357 1165 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 CLCN5P51795 746 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 SLC12A2P55011 1212 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 MLLT6P55198 1093 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 WNT3AP56704 352 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 TBX4P57082 545 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 PFKPQ01813 784 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 FLOT2Q14254 428 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 FAM83EQ2M2I3 478 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 NAIF1Q69YI7 327 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 NXNQ6DKJ4 435 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 CHSY3Q70JA7 882 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 MIB1Q86YT6 1006 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ST13P4Q8IZP2 240 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 GALNT15Q8N3T1 639 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 CCNYL1Q8N7R7 359 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ZFAND2BQ8WV99 257 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 AUTS2Q8WXX7 1259 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ZBED2Q9BTP6 218 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 WDR41Q9HAD4 459 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 PAPOLBQ9NRJ5 636 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 COMMD8Q9NX08 183 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 UTP6Q9NYH9 597 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 IPO11Q9UI26 975 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 TLR6Q9Y2C9 796 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 FAM92AA1XBS5 289 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 TCAF2A6NFQ2 919 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 FGBP02675 491 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 HMBSP08397 361 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 SLC2A3P11169 496 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 XRCC1P18887 633 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 CHRNA4P43681 627 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 GALNT1Q10472 559 aaPredicted RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 CEACAM7Q14002 265 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 MMEL1Q495T6 779 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 AGAP9Q5VTM2 703 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 MSANTD2Q6P1R3 559 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 CNSTQ6PJW8 725 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 UMODL1-AS1Q8N2C9 162 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 ICA1LQ8NDH6 482 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 IMP4Q96G21 291 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 HERC2P3Q9BVR0 1158 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 NOL6Q9H6R4 1146 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 PIDD1Q9HB75 910 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 VPS45Q9NRW7 570 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 OLA1Q9NTK5 396 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDH1-213ENST00000612417 MARCH2Q9P0N8 246 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 AFF4Q9UHB7 1163 aaKnown RBP14.75□□□□□ -0.05
CDH1-213ENST00000612417 DTNAQ9Y4J8 743 aa14.75□□□□□ -0.05
CDH1-213ENST00000612417 TMEM233B4DJY2 109 aa14.74□□□□□ -0.05
CDH1-213ENST00000612417 BCAS2O75934 225 aaPredicted RBP14.74□□□□□ -0.05
CDH1-213ENST00000612417 SEC24AO95486 1093 aa14.74□□□□□ -0.05
CDH1-213ENST00000612417 CAPNS1P04632 268 aa14.74□□□□□ -0.05
CDH1-213ENST00000612417 ME2P23368 584 aa14.74□□□□□ -0.05
CDH1-213ENST00000612417 DPP6P42658 865 aa14.74□□□□□ -0.05
CDH1-213ENST00000612417 PSMD8P48556 350 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms