RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PRR23CQ6ZRP0 262 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 IQCHQ86VS3 1027 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 RAVER1Q8IY67 606 aaKnown RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 IPMKQ8NFU5 416 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 ATL2Q8NHH9 583 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 MAGOHBQ96A72 148 aaKnown RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 OXNAD1Q96HP4 312 aaPredicted RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 MRGPRX2Q96LB1 330 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 AP1M1Q9BXS5 423 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 CAPN10Q9HC96 672 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 PAK5Q9P286 719 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 FEZ2Q9UHY8 353 aaPredicted RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 VPS13AQ96RL7 3174 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 ABCA7Q8IZY2 2146 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 PATE3B3GLJ2 98 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 F5H423 210 aaPredicted RBP14.29□□□□□ -0.12
CTSA-219ENST00000607841 ARHGAP33O14559 1287 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 ZNF185O15231 689 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 TUBB4AP04350 444 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 TGM1P22735 817 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 CSNK1EP49674 416 aaKnown RBP14.29□□□□□ -0.12
CTSA-219ENST00000607841 IRX4P78413 519 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 FGL2Q14314 439 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 LRRC14Q15048 493 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 ACOX1Q15067 660 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 CNGA3Q16281 694 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 AASDHQ4L235 1098 aaPredicted RBP14.29□□□□□ -0.12
CTSA-219ENST00000607841 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 TMEM145Q8NBT3 493 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 CCHCR1Q8TD31 782 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 KLHDC7BQ96G42 594 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 SMOC1Q9H4F8 434 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 MAGEE1Q9HCI5 957 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 FZD3Q9NPG1 666 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 SHROOM3Q8TF72 1996 aa14.29□□□□□ -0.12
CTSA-219ENST00000607841 A0A1W2PR77 199 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 A6NNZ2 444 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 TLR4O00206 839 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 TOR1BO14657 336 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 WNT9AO14904 365 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 RECQL5O94762 991 aaPredicted RBP14.28□□□□□ -0.12
CTSA-219ENST00000607841 METTL18O95568 372 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 FGF1P05230 155 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 LHCGRP22888 699 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 FDFT1P37268 417 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 RABIFP47224 123 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 KCNJ1P48048 391 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 SF3A2Q15428 464 aaKnown RBP14.28□□□□□ -0.12
CTSA-219ENST00000607841 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 CYP1B1Q16678 543 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 TCEAL6Q6IPX3 200 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 SYT10Q6XYQ8 523 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 THADAQ6YHU6 1953 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
CTSA-219ENST00000607841 GRK7Q8WTQ7 553 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 TCEAL3Q969E4 200 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 CENPTQ96BT3 561 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
CTSA-219ENST00000607841 MYOCQ99972 504 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 TRABDQ9H4I3 376 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 LRRC40Q9H9A6 602 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 HACD3Q9P035 362 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 ANKRD6Q9Y2G4 727 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 COQ6Q9Y2Z9 468 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 SLCO1B1Q9Y6L6 691 aa14.28□□□□□ -0.12
CTSA-219ENST00000607841 ZFHX2Q9C0A1 2572 aaPredicted RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 C1orf232A0A0U1RR37 186 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 A0A1B0GVT2 93 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 LNP1A1A4G5 178 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 RGSL1A5PLK6 1076 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 ERI2A8K979 691 aaKnown RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 E7EVH7 732 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 RAD51BO15315 384 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 PHF2O75151 1096 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 ENGP17813 658 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 COILP38432 576 aaPredicted RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 LMAN1P49257 510 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 FNTAP49354 379 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 CLDN2P57739 230 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 YPEL5P62699 121 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 PTSQ03393 145 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 GRIK2Q13002 908 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 SIRPB2Q5JXA9 342 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 CCDC137Q6PK04 289 aaKnown RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 RANBP10Q6VN20 620 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 GCNT7Q6ZNI0 430 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 ABI3BPQ7Z7G0 1075 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 TSPAN33Q86UF1 283 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 CREG2Q8IUH2 290 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
CTSA-219ENST00000607841 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.13
CTSA-219ENST00000607841 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms