RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 TP53I13Q8NBR0 393 aaPredicted RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 FAM71BQ8TC56 605 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 ADAMTS14Q8WXS8 1223 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 FAF2Q96CS3 445 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 ECHDC3Q96DC8 303 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 BMFQ96LC9 184 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 PANX2Q96RD6 677 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 KLF6Q99612 283 aaPredicted RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 MAK16Q9BXY0 300 aaKnown RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 POLR1EQ9GZS1 481 aaKnown RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 NT5MQ9NPB1 228 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 APOBEC3BQ9UH17 382 aaKnown RBP5.89□□□□□ -1.47
FOCAD-213ENST00000604254 KLK13Q9UKR3 277 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 COQ6Q9Y2Z9 468 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 GPSM3Q9Y4H4 160 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 HYOU1Q9Y4L1 999 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 NEUROG3Q9Y4Z2 214 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 HEY1Q9Y5J3 304 aa5.89□□□□□ -1.47
FOCAD-213ENST00000604254 URB1O60287 2271 aaKnown RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 MYLKQ15746 1914 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 AKAP13Q12802 2813 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 SPTY2D1-AS1A0A0U1RR47 76 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 NEMP2A6NFY4 417 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 A8MX80 341 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 GOLGA6L6A8MZA4 724 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ZNF487B1APH4 448 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 J3QL48 77 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 TRAFD1O14545 582 aaPredicted RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 TOR1BO14657 336 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PPP1R12AO14974 1030 aaPredicted RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 MATN3O15232 486 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PSTPIP1O43586 416 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 RFPL3O75679 317 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PIAS2O75928 621 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PEX11BO96011 259 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CSF2P04141 144 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CYP2A6P11509 494 aaPredicted RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 KRT10P13645 584 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CCNB1P14635 433 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 NME1P15531 152 aaKnown RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ZFXP17010 805 aaPredicted RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CR2P20023 1033 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 COMTP21964 271 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DGKAP23743 735 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 IL4RP24394 825 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CCNCP24863 283 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 VARSP26640 1264 aaKnown RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 VIPR1P32241 457 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 EPHB1P54762 984 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 HADHBP55084 474 aaKnown RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PFN3P60673 137 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 YPEL5P62699 121 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DYNLT1P63172 113 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DAB2P98082 770 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 GBE1Q04446 702 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 TRAF2Q12933 501 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 RALGDSQ12967 914 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DNAJC3Q13217 504 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ARHGEF7Q14155 803 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 FZD2Q14332 565 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ACOX1Q15067 660 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ZNF542PQ5EBM4 170 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ARMC12Q5T9G4 340 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 LRRC38Q5VT99 294 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DENND2CQ68D51 928 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 C11orf63Q6NUN7 778 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 MACC1Q6ZN28 852 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 USP45Q70EL2 814 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 DPPA4Q7L190 304 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 SLCO6A1Q86UG4 719 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 VSIG1Q86XK7 387 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CCDC50Q8IVM0 306 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CCDC13Q8IYE1 715 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 NDUFAF2Q8N183 169 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 GALNT15Q8N3T1 639 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 PQLC3Q8N755 202 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ZNF548Q8NEK5 533 aaPredicted RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 ATL2Q8NHH9 583 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 BTN2A2Q8WVV5 523 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 RAPGEF5Q92565 580 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 MAML1Q92585 1016 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 CENPTQ96BT3 561 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 HDAC11Q96DB2 347 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 RNF157Q96PX1 679 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 SEMA3CQ99985 751 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 SLC13A1Q9BZW2 595 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 NOD2Q9HC29 1040 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 GPR27Q9NS67 375 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 RBM22Q9NW64 420 aaKnown RBP eCLIP5.88□□□□□ -1.47
FOCAD-213ENST00000604254 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
FOCAD-213ENST00000604254 TOR4AQ9NXH8 423 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms