RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GZMAP12544 262 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 PSMA2P25787 234 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 SLC5A2P31639 672 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 ZSCAN23Q3MJ62 389 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 C14orf28Q4W4Y0 310 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 PLEKHA7Q6IQ23 1121 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 DPPA4Q7L190 304 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 CCNJLQ8IV13 435 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 TSEN2Q8NCE0 465 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 DHX35Q9H5Z1 703 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 SP110Q9HB58 689 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 NAV2Q8IVL1 2488 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 SLC28A2O43868 658 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 PRPSAP2O60256 369 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 CELA2BP08218 269 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 LIPCP11150 499 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 TCEA2Q15560 299 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 RALGPS1Q5JS13 557 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 PNCKQ6P2M8 343 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 RFX8Q6ZV50 586 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 IRF2BP2Q7Z5L9 587 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 BBS5Q8N3I7 341 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 ZSCAN1Q8NBB4 408 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 FUBP1Q96AE4 644 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 WDR26Q9H7D7 661 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 LMBRD1Q9NUN5 540 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 LRIT1Q9P2V4 623 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 RABGEF1Q9UJ41 708 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 PCDHB11Q9Y5F2 797 aa17.88■□□□□ 0.45
SHKBP1-227ENST00000602011 TRAFD1O14545 582 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 SOCS5O75159 536 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 ERCC2P18074 760 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 TEAD1P28347 426 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 SCNN1BP51168 640 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 HLTFQ14527 1009 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 STX1AQ16623 288 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 USP53Q70EK8 1073 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 B3GNT8Q7Z7M8 397 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 JAMLQ86YT9 394 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 NETO2Q8NC67 525 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 OR1E3Q8WZA6 343 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 SGF29Q96ES7 293 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 CELF6Q96J87 481 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 DPEP2Q9H4A9 486 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 CLMPQ9H6B4 373 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 ZWILCHQ9H900 591 aa17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 MRPL47Q9HD33 250 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 PHPT1Q9NRX4 125 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 TRNAU1APQ9NX07 287 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-227ENST00000602011 A0A1W2PQC6 194 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 TMEM202A6NGA9 273 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 TMEM191CA6NGB0 347 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 RALGDSQ12967 914 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 SRSF6Q13247 344 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 BOLA3Q53S33 107 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 SPRED1Q7Z699 444 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 PIM3Q86V86 326 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 ZSWIM9Q86XI8 627 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 NDUFAF2Q8N183 169 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 PLA2G15Q8NCC3 412 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 GPBAR1Q8TDU6 330 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 TRIM11Q96F44 468 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 PDXPQ96GD0 296 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 GSDMCQ9BYG8 508 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 TRIM4Q9C037 500 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 PHTF1Q9UMS5 762 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 LOXL2Q9Y4K0 774 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 SCINQ9Y6U3 715 aa17.86■□□□□ 0.45
SHKBP1-227ENST00000602011 PSMD11O00231 422 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 AGRPO00253 132 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 DFFAO00273 331 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 EFSO43281 561 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 HTRA2O43464 458 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 NOBOXO60393 691 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 CPNE6O95741 557 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 CYP2A6P11509 494 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 MYCLP1P12525 358 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 PCK1P35558 622 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 GPR3P46089 330 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 RGRP47804 291 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 OGDHQ02218 1023 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 ILF3Q12906 894 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 LBRQ14739 615 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 ACOX1Q15067 660 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 SPECC1LQ69YQ0 1117 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 PRICKLE2Q7Z3G6 844 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 C17orf82Q86X59 251 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 LRRC49Q8IUZ0 686 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 ARHGAP12Q8IWW6 846 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 UNC13CQ8NB66 2214 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 NSMCE1Q8WV22 266 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 DPYSL5Q9BPU6 564 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 SYT11Q9BT88 431 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 SNRNP25Q9BV90 132 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 FOXP3Q9BZS1 431 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 NAT10Q9H0A0 1025 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 TMEM168Q9H0V1 697 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 CYP4F12Q9HCS2 524 aa17.85■□□□□ 0.45
SHKBP1-227ENST00000602011 FGF22Q9HCT0 170 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms