RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
LSM4-205ENST00000597776 DGKBQ9Y6T7 804 aa10.57□□□□□ -0.72
LSM4-205ENST00000597776 CFAP69A5D8W1 941 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 EIF3CLB5ME19 914 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 TRAFD1O14545 582 aaPredicted RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 EFSO43281 561 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 NOBOXO60393 691 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 LRCH4O75427 683 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 RNF8O76064 485 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 FTLP02792 175 aaPredicted RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 TCF4P15884 667 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 AP1S1P61966 158 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 TYRO3Q06418 890 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 IL10RBQ08334 325 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 SLC10A7Q0GE19 358 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 SRSF6Q13247 344 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 DPYSQ14117 519 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 LBRQ14739 615 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 ACOX1Q15067 660 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 PTPRRQ15256 657 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 TGIF1Q15583 401 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 CERCAMQ5T4B2 595 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 CCDC81Q6ZN84 652 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 TMPRSS9Q7Z410 1059 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 ZNF653Q96CK0 615 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 WBP1Q96G27 269 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 PSKH2Q96QS6 385 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 EIF3CQ99613 913 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 STRADBQ9C0K7 418 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 DPEP2Q9H4A9 486 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 HAUS4Q9H6D7 363 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 WDR26Q9H7D7 661 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 ASH1LQ9NR48 2969 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 B4GALT6Q9UBX8 382 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 CNOT8Q9UFF9 292 aaKnown RBP10.56□□□□□ -0.72
LSM4-205ENST00000597776 PISDQ9UG56 409 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 MOSPD1Q9UJG1 213 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 RNF215Q9Y6U7 377 aa10.56□□□□□ -0.72
LSM4-205ENST00000597776 PRSS38A1L453 326 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PYCARD-AS1I3L0S3 204 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 DDX3XO00571 662 aaKnown RBP eCLIP10.55□□□□□ -0.722e-52■■■■■ 41
LSM4-205ENST00000597776 PEX11BO96011 259 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 JMJD7P0C870 316 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 GLB1P16278 677 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 ITIH1P19827 911 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 KELP23276 732 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 IL1R2P27930 398 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 CCKBRP32239 447 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 TRIM23P36406 574 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 MAZP56270 477 aaKnown RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 POLR2LP62875 67 aaKnown RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 NSUN2Q08J23 767 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSM4-205ENST00000597776 EIF3IQ13347 325 aaKnown RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSM4-205ENST00000597776 ZNF235Q14590 738 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 CNGA3Q16281 694 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 C14orf28Q4W4Y0 310 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 DENND2CQ68D51 928 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 SPECC1LQ69YQ0 1117 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PPP1R2P3Q6NXS1 205 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PNCKQ6P2M8 343 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 OGFOD3Q6PK18 319 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 SPRED1Q7Z699 444 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PGBD5Q8N414 524 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 OR6C4Q8NGE1 309 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 FNIP1Q8TF40 1166 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 HSPH1Q92598 858 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 NUS1Q96E22 293 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 COQ10AQ96MF6 247 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 CCNL2Q96S94 520 aaPredicted RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
LSM4-205ENST00000597776 LRIT1Q9P2V4 623 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 MYO1AQ9UBC5 1043 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 LOXL2Q9Y4K0 774 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PCDHGC4Q9Y5F7 938 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PCDHGA7Q9Y5G6 932 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 BOD1L1Q8NFC6 3051 aa10.55□□□□□ -0.72
LSM4-205ENST00000597776 PIEZO2Q9H5I5 2752 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 A0A0U1RQS6 177 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 H3BRJ5 948 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 TMX2-CTNND1H3BSU7 103 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 TNFRSF10CO14798 259 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 HTRA2O43464 458 aaPredicted RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 CPP00450 1065 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms