RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 HEXIM1O94992 359 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 ITGAVP06756 1048 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 FTH1P19P0C7X4 201 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 NME1P15531 152 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 CTPS1P17812 591 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 DGKAP23743 735 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 VIPR1P32241 457 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 NR2C2P49116 596 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 NAP1L1P55209 391 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 GSDMDP57764 484 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 SKOR1P84550 965 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 SHC2P98077 582 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 FOXC1Q12948 553 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 TFDP2Q14188 446 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 INPP5AQ14642 412 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 LRRC14Q15048 493 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 KCTD16Q68DU8 428 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 AADACL2Q6P093 401 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 BBS12Q6ZW61 710 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PARGQ86W56 976 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 CCDC50Q8IVM0 306 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 EID2Q8N6I1 236 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PAF1Q8N7H5 531 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PNPLA1Q8N8W4 532 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 HAUS1Q96CS2 278 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 IFT43Q96FT9 208 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 C1QTNF7Q9BXJ2 289 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 HEMGNQ9BXL5 484 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 TCEAL2Q9H3H9 227 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PHTF1Q9UMS5 762 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PACSIN2Q9UNF0 486 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 CHKBQ9Y259 395 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 CAPN6Q9Y6Q1 641 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 DSPP15924 2871 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 A0A0J9YYE9 177 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CCDC66A2RUB6 948 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CAPN8A6NHC0 703 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 K7ESM1 405 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 TRIM38O00635 465 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 LZTS3O60299 673 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 TRBC1P01850 177 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CSF2P04141 144 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 PCCBP05166 539 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 PYGMP11217 842 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 SPINK2P20155 84 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CES1P23141 567 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 PTPN3P26045 913 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 PTPN7P35236 360 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 HNF1BP35680 557 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CD86P42081 329 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 COPS2P61201 443 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 YPEL5P62699 121 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 WASHC5Q12768 1159 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 KIF5AQ12840 1032 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CRTC1Q6UUV9 634 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 MACC1Q6ZN28 852 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 RFLNAQ6ZTI6 216 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 HSD11B1LQ7Z5J1 315 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 RAB44Q7Z6P3 723 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 RBFAQ8N0V3 343 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 AGAP3Q96P47 875 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 QKIQ96PU8 341 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 TRIB3Q96RU7 358 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 RBM15Q96T37 977 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CDC6Q99741 560 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 FTSJ1Q9UET6 329 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 OR1A2Q9Y585 309 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 ACACAQ13085 2346 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 CELSR3Q9NYQ7 3312 aa11.01□□□□□ -0.65
SHKBP1-206ENST00000595523 LAMA5O15230 3695 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 APC2O95996 2303 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 GOLGA6L6A8MZA4 724 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 TOR1BO14657 336 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 DDX3YO15523 660 aaKnown RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 TNFSF14O43557 240 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 SIGLEC6O43699 453 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 HYAL3O43820 417 aaPredicted RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 NEBLO76041 1014 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 FTCDO95954 541 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 APOC2P02655 101 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CYP2A6P11509 494 aaPredicted RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 CD68P34810 354 aaPredicted RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 TRIM23P36406 574 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ETV3P41162 512 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 THOP1P52888 689 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 RWDD2BP57060 319 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CCZ1BP86790 482 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CCZ1P86791 482 aaPredicted RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 DNAJC3Q13217 504 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 MTM1Q13496 603 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms