RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 THAP2Q9H0W7 228 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 CAPN11Q9UMQ6 739 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 PHTF1Q9UMS5 762 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 SATB2Q9UPW6 733 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 PCDHGA8Q9Y5G5 932 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 WDFY3Q8IZQ1 3526 aa18.54■□□□□ 0.56
IRF3-209ENST00000595034 TEX51A0A1B0GUA7 166 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 TRAFD1O14545 582 aaPredicted RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 APC2O95996 2303 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 IL1R2P27930 398 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 VIPR1P32241 457 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 TMPRSS3P57727 454 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 RALGDSQ12967 914 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 EIF3IQ13347 325 aaKnown RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 HGSNATQ68CP4 663 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 TIGD7Q6NT04 549 aaPredicted RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 ALKBH5Q6P6C2 394 aaKnown RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 MAP7D3Q8IWC1 876 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 SPACA3Q8IXA5 215 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 KYQ8NBH2 561 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 KIAA1524Q8TCG1 905 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 ATXN7L3BQ96GX2 97 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 MGME1Q9BQP7 344 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 FUCA2Q9BTY2 467 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 PRORYQ9H606 182 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 PHPT1Q9NRX4 125 aaPredicted RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 B4GALT6Q9UBX8 382 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 PNMA8BQ9ULN7 279 aaPredicted RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.563e-7■■■□□ 15.9
IRF3-209ENST00000595034 ENTPD2Q9Y5L3 495 aa18.53■□□□□ 0.56
IRF3-209ENST00000595034 URB1O60287 2271 aaKnown RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 ARID1BQ8NFD5 2236 aaPredicted RBP18.53■□□□□ 0.56
IRF3-209ENST00000595034 CCDC187A0A096LP49 1063 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 A8MX80 341 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 PSMD11O00231 422 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 HTRA2O43464 458 aaPredicted RBP18.52■□□□□ 0.56
IRF3-209ENST00000595034 MAFKO60675 156 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 CA4P22748 312 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 CXADRP78310 365 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 TLE3Q04726 772 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 ITKQ08881 620 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 TCEA2Q15560 299 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 ARMC12Q5T9G4 340 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 PNCKQ6P2M8 343 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 PLA2G15Q8NCC3 412 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 FAM46DQ8NEK8 389 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 FUBP1Q96AE4 644 aaKnown RBP18.52■□□□□ 0.56
IRF3-209ENST00000595034 CCDC74AQ96AQ1 378 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 PDXPQ96GD0 296 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 NAF1Q96HR8 494 aaKnown RBP18.52■□□□□ 0.56
IRF3-209ENST00000595034 TMEM74Q96NL1 305 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 PCDH18Q9HCL0 1135 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.52■□□□□ 0.56
IRF3-209ENST00000595034 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.56
IRF3-209ENST00000595034 CACNA1GO43497 2377 aa18.52■□□□□ 0.55
IRF3-209ENST00000595034 TDRD6O60522 2096 aaKnown RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 GOLGA6CA6NDK9 693 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 GOLGA6BA6NDN3 693 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 TK2O00142 265 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 CYP1A2P05177 515 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 CELA2BP08218 269 aaPredicted RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 GOLGA6DP0CG33 693 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 MYCLP1P12525 358 aaPredicted RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 CES1P23141 567 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 TRIM23P36406 574 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 BIRC2Q13490 618 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 ZFYVE27Q5T4F4 411 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 DENND2CQ68D51 928 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 LSM14AQ8ND56 463 aaKnown RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 CTNNBL1Q8WYA6 563 aaPredicted RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 CRELD1Q96HD1 420 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 HIC2Q96JB3 615 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 SLC46A1Q96NT5 459 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 POLR1EQ9GZS1 481 aaKnown RBP18.51■□□□□ 0.55
IRF3-209ENST00000595034 DPEP2Q9H4A9 486 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 NOD2Q9HC29 1040 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 CYP4F12Q9HCS2 524 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 GOLGA6AQ9NYA3 693 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 CTTNBP2NLQ9P2B4 639 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 DNPEPQ9ULA0 475 aa18.51■□□□□ 0.55
IRF3-209ENST00000595034 KNTC1P50748 2209 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 A0A087X0T9 212 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 TMEM202A6NGA9 273 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 KLK10O43240 276 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 HEXIM1O94992 359 aaKnown RBP18.5■□□□□ 0.55
IRF3-209ENST00000595034 KRT7P08729 469 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 TPM1P09493 284 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 FAM228BP0C875 321 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 GLB1P16278 677 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 EPHB1P54762 984 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 SLC25A11Q02978 314 aaKnown RBP18.5■□□□□ 0.55
IRF3-209ENST00000595034 ILF3Q12906 894 aaKnown RBP eCLIP18.5■□□□□ 0.55
IRF3-209ENST00000595034 PDK2Q15119 407 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 ZNF564Q8TBZ8 553 aaPredicted RBP18.5■□□□□ 0.55
IRF3-209ENST00000595034 OR1E3Q8WZA6 343 aa18.5■□□□□ 0.55
IRF3-209ENST00000595034 LIN37Q96GY3 246 aaPredicted RBP18.5■□□□□ 0.55
IRF3-209ENST00000595034 COQ10AQ96MF6 247 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms