RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TRBC1P01850 177 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 ALPIP09923 528 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 CEACAM1P13688 526 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 KCNA4P22459 653 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 LHCGRP22888 699 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 EPHA8P29322 1005 aaPredicted RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 CD68P34810 354 aaPredicted RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 ARRB1P49407 418 aaPredicted RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 EIF3EP60228 445 aaKnown RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 RPL26P61254 145 aaKnown RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 KLF1Q13351 362 aaPredicted RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 ACOX1Q15067 660 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 PTPRRQ15256 657 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 SLC14A2Q15849 920 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 WSCD2Q2TBF2 565 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 TSPAN33Q86UF1 283 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 NDUFAF2Q8N183 169 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 PDLIM2Q96JY6 352 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 CAMK1GQ96NX5 476 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 SMIM14Q96QK8 99 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 VAT1Q99536 393 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 FAM118BQ9BPY3 351 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 SLC32A1Q9H598 525 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 RPL26L1Q9UNX3 145 aaKnown RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 CAPN8A6NHC0 703 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 PCCBP05166 539 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
VRK3-206ENST00000594090 NFKB1P19838 968 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 RBL1P28749 1068 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 HNF1BP35680 557 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 PDE1CQ14123 709 aaPredicted RBP14.59□□□□□ -0.07
VRK3-206ENST00000594090 FZD2Q14332 565 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 SUZ12Q15022 739 aaKnown RBP14.59□□□□□ -0.07
VRK3-206ENST00000594090 TPRG1LQ5T0D9 272 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 MEI1Q5TIA1 1274 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
VRK3-206ENST00000594090 ZNF567Q8N184 647 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 TRIM58Q8NG06 486 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 SPATA22Q8NHS9 363 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 SAP25Q8TEE9 199 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 COQ10AQ96MF6 247 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 TRIB3Q96RU7 358 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 C10orf88Q9H8K7 445 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 KLHL8Q9P2G9 620 aaPredicted RBP14.59□□□□□ -0.07
VRK3-206ENST00000594090 BTBD3Q9Y2F9 522 aa14.59□□□□□ -0.07
VRK3-206ENST00000594090 SPTY2D1-AS1A0A0U1RR47 76 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 GOLGA6L9A6NEM1 432 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 GOLGA8CPA6NN73 597 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 PSMD11O00231 422 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 TOR1BO14657 336 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 MT-CYBP00156 380 aaPredicted RBP14.58□□□□□ -0.07
VRK3-206ENST00000594090 RBP3P10745 1247 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 YPEL5P62699 121 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 MTM1Q13496 603 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 ARHGEF7Q14155 803 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 GALNT3Q14435 633 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 RPS6KA1Q15418 735 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 PCSK7Q16549 785 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 QPCTQ16769 361 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 LRRC66Q68CR7 880 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 DENND2CQ68D51 928 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 HSD11B1LQ7Z5J1 315 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 PARGQ86W56 976 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 GATAD2AQ86YP4 633 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 TTC13Q8NBP0 860 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 SETD7Q8WTS6 366 aaKnown RBP14.58□□□□□ -0.07
VRK3-206ENST00000594090 NUS1Q96E22 293 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 DTD2Q96FN9 168 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 IFT43Q96FT9 208 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 FERMT1Q9BQL6 677 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 ADGRE3Q9BY15 652 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 TRHDEQ9UKU6 1024 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 PCOLCE2Q9UKZ9 415 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 DNPEPQ9ULA0 475 aa14.58□□□□□ -0.07
VRK3-206ENST00000594090 A0A0U1RQS6 177 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 SDC3O75056 442 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 CBFA2T3O75081 653 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 ITGAVP06756 1048 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 ZNF30P17039 623 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 GRK6P43250 576 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 THOP1P52888 689 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 BNIP3Q12983 259 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 PTK2BQ14289 1009 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 INPP5AQ14642 412 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 INAVAQ3KP66 663 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 ESRP1Q6NXG1 681 aaKnown RBP14.58□□□□□ -0.08
VRK3-206ENST00000594090 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.08
VRK3-206ENST00000594090 CRTC1Q6UUV9 634 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 PID1Q7Z2X4 250 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 KANSL1Q7Z3B3 1105 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 CBARPQ8N350 705 aaPredicted RBP14.58□□□□□ -0.08
VRK3-206ENST00000594090 PLA2G15Q8NCC3 412 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 BAHD1Q8TBE0 780 aaPredicted RBP14.58□□□□□ -0.08
VRK3-206ENST00000594090 FCRL5Q96RD9 977 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 LYSMD1Q96S90 227 aa14.58□□□□□ -0.08
VRK3-206ENST00000594090 MLPHQ9BV36 600 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms