RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 SCN1BQ07699 218 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TBL3Q12788 808 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 LMAN2Q12907 356 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 RALGDSQ12967 914 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 NPRL3Q12980 569 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 GPS1Q13098 491 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SNTB1Q13884 538 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 PDK1Q15118 436 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 KCNA10Q16322 511 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 BOLA3Q53S33 107 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 ABLIM2Q6H8Q1 611 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TMEM154Q6P9G4 183 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TMEM270Q6UE05 265 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MARK2Q7KZI7 788 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 KBTBD6Q86V97 674 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 BCL6BQ8N143 479 aaPredicted RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 STPG3Q8N7X2 389 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MRPL43Q8N983 215 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 FBXO15Q8NCQ5 510 aaPredicted RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 RNF139Q8WU17 664 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CORO2AQ92828 525 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 GFM2Q969S9 779 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MIEF2Q96C03 454 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 INTS12Q96CB8 462 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SAAL1Q96ER3 474 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 ZDHHC12Q96GR4 267 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CLIC6Q96NY7 704 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 DGAT2Q96PD7 388 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 PPP1R10Q96QC0 940 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 FIZ1Q96SL8 496 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 FAM118BQ9BPY3 351 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TTPALQ9BTX7 342 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MRIQ9BWK5 157 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 ACPTQ9BZG2 426 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TRIM7Q9C029 511 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 ABCG8Q9H221 673 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SLC25A32Q9H2D1 315 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MAGEE1Q9HCI5 957 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CD93Q9NPY3 652 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 BABAM1Q9NWV8 329 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 AIPL1Q9NZN9 384 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TMOD2Q9NZR1 351 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 XPR1Q9UBH6 696 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 TRPS1Q9UHF7 1281 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 MAGEL2Q9UJ55 1249 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 ANAPC2Q9UJX6 822 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CFAP45Q9UL16 551 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 HPSEQ9Y251 543 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
LINC00649-204ENST00000593977 VWA7Q9Y334 891 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CLDN16Q9Y5I7 305 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 SESN1Q9Y6P5 492 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 COL12A1Q99715 3063 aa4.3□□□□□ -1.72
LINC00649-204ENST00000593977 CCDC187A0A096LP49 1063 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 LINC00854A0A1B0GVQ3 168 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GCOM1H8Y6P7 765 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 VWA5AO00534 786 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 LDLRAD4O15165 306 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 RRP9O43818 475 aaKnown RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 CNMDO75829 334 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 MED26O95402 600 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ADCY5O95622 1261 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 PCCAP05165 728 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 RNASE1P07998 156 aaKnown RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ABCB1P08183 1280 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GNAI3P08754 354 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 PRR35P0CG20 571 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 EIF2S2P20042 333 aaKnown RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 SPINK2P20155 84 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ITGB7P26010 798 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GPD2P43304 727 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ATXN3P54252 364 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 EPHB3P54753 998 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 CASP9P55211 416 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ADARP55265 1226 aaKnown RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GNAI1P63096 354 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 IRX3P78415 501 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 FAM189BP81408 668 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 BEX3Q00994 111 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 TCP10Q12799 353 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 TRA2AQ13595 282 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ALCAMQ13740 583 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 EIF4HQ15056 248 aaKnown RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 TRADDQ15628 312 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 HYAL4Q2M3T9 481 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 MYLK3Q32MK0 819 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 HSP90AA5PQ58FG0 334 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 CAVIN4Q5BKX8 364 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 SPDYAQ5MJ70 313 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 C12orf60Q5U649 245 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 MANEALQ5VSG8 457 aa4.29□□□□□ -1.72
LINC00649-204ENST00000593977 GKAP1Q5VSY0 366 aaPredicted RBP4.29□□□□□ -1.72
LINC00649-204ENST00000593977 ERICH6BQ5W0A0 696 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms