RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 RETREG1Q9H6L5 497 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SUDS3Q9H7L9 328 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 HCSTQ9UBK5 93 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 BCAP29Q9UHQ4 241 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 BPTFQ12830 3046 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 CCDC162PA2VCL2 907 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 HOXA2O43364 376 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SMIM24O75264 130 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 NDST3O95803 873 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 OGNP20774 298 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 IMPDH1P20839 514 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 GNA12Q03113 381 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 BFSP2Q13515 415 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 IL31Q6EBC2 164 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 RNF111Q6ZNA4 994 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SPNS2Q8IVW8 549 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 CD99L2Q8TCZ2 262 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SPDL1Q96EA4 605 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 L3HYPDHQ96EM0 354 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 MGME1Q9BQP7 344 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 MRPL9Q9BYD2 267 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 KLHL4Q9C0H6 718 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 NACA2Q9H009 215 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 CATSPERZQ9NTU4 200 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 SEPT3Q9UH03 358 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 ADAMTS6Q9UKP5 1117 aa16.61■□□□□ 0.25
PRKCSH-217ENST00000592741 DPPA5A6NC42 116 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 CFLARO15519 480 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ATF6P18850 670 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 HOXD9P28356 352 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 SLC6A4P31645 630 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ATP5C1P36542 298 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 SLC11A2P49281 568 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 CDH4P55283 916 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 XIAPP98170 497 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 NFKB2Q00653 900 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 SQLEQ14534 574 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 MAPRE2Q15555 327 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PIGGQ5H8A4 983 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 CHSY3Q70JA7 882 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ISCA2Q86U28 154 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 NPAS4Q8IUM7 802 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 OR13C4Q8NGS5 318 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 SEPT8Q92599 483 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 CINPQ9BW66 212 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 GSTO2Q9H4Y5 243 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 POPDC3Q9HBV1 291 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 UBA2Q9UBT2 640 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PACSIN3Q9UKS6 424 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 A0A0D9SEW6 157 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 GALTP07902 379 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 THOP1P52888 689 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 INHBCP55103 352 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 NOGQ13253 232 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ZNF423Q2M1K9 1284 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ZNF678Q5SXM1 525 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 LHX8Q68G74 356 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ZNF549Q6P9A3 640 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 RPS27LQ71UM5 84 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PDSS2Q86YH6 399 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 OR7D4Q8NG98 312 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 PXYLP1Q8TE99 480 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 GDPD5Q8WTR4 605 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 TRPC7Q9HCX4 862 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-217ENST00000592741 TCAF2A6NFQ2 919 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TBKBP1A7MCY6 615 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 H3BNX3 289 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 UBDO15205 165 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 AOC2O75106 756 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TRPA1O75762 1119 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 SUPT7LO94864 414 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 CD1DP15813 335 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 PMLP29590 882 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 OXCT1P55809 520 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 FLOT2Q14254 428 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 PTPRCAPQ14761 206 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TAS1R1Q7RTX1 841 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 PDZD8Q8NEN9 1154 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 GATA6Q92908 595 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TRIB3Q96RU7 358 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 SPON2Q9BUD6 331 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TNFRSF12AQ9NP84 129 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 TRAF6Q9Y4K3 522 aa16.59■□□□□ 0.25
PRKCSH-217ENST00000592741 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 KIF1CO43896 1103 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 CRTAMO95727 393 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 INHAP05111 366 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 PIRTP0C851 137 aa16.58■□□□□ 0.25
PRKCSH-217ENST00000592741 ME2P23368 584 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms