RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 AP2A1O95782 977 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 PAK4O96013 591 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-214ENST00000590556 FGF1P05230 155 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 RETP07949 1114 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 LHCGRP22888 699 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 CHRNA4P43681 627 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 VPS41P49754 854 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 CKAP4Q07065 602 aaKnown RBP19.19■□□□□ 0.66
DDX39A-214ENST00000590556 GPS1Q13098 491 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 OLIG2Q13516 323 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SEMA5AQ13591 1074 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 TUBB2AQ13885 445 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 PPP1R7Q15435 360 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 CNGA3Q16281 694 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 KCTD19Q17RG1 926 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-214ENST00000590556 RANBP10Q6VN20 620 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 TSPAN33Q86UF1 283 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SYT12Q8IV01 421 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SPATA4Q8NEY3 305 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 ASB12Q8WXK4 309 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SLCO2A1Q92959 643 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SERAC1Q96JX3 654 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 LYSMD1Q96S90 227 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 SRPK1Q96SB4 655 aaKnown RBP19.19■□□□□ 0.66
DDX39A-214ENST00000590556 PHOX2BQ99453 314 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 ORAI3Q9BRQ5 295 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 TUBB2BQ9BVA1 445 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 ARRDC1-AS1Q9H2J1 176 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 MAGEE1Q9HCI5 957 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 GMEB2Q9UKD1 530 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 PILRBQ9UKJ0 227 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 COQ6Q9Y2Z9 468 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 NEU2Q9Y3R4 380 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 PCDHGA5Q9Y5G8 931 aa19.19■□□□□ 0.66
DDX39A-214ENST00000590556 ATXN2Q99700 1313 aaKnown RBP19.19■□□□□ 0.66
DDX39A-214ENST00000590556 A0A0U1RQS6 177 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 USP12O75317 370 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 PIRTP0C851 137 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 ZNF30P17039 623 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 BASP1P80723 227 aaKnown RBP19.18■□□□□ 0.66
DDX39A-214ENST00000590556 FGL2Q14314 439 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 ACOX1Q15067 660 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 WHAMMP3Q1A5X7 153 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 LRRC66Q68CR7 880 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 DENND2CQ68D51 928 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 NAPEPLDQ6IQ20 393 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 KRT12Q99456 494 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 C1QTNF7Q9BXJ2 289 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 TMEM74BQ9NUR3 256 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 SUSD2Q9UGT4 822 aa19.18■□□□□ 0.66
DDX39A-214ENST00000590556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-214ENST00000590556 C1orf232A0A0U1RR37 186 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 PRAMEF26H0Y7S4 382 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 PSMD11O00231 422 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 CLDN7O95471 211 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 APRTP07741 180 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 GNSP15586 552 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 AKT2P31751 481 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 HOXD12P35452 270 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 PTGIRP43119 386 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 DR1Q01658 176 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 ZNF572Q7Z3I7 529 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-214ENST00000590556 LINC00523Q86TU6 105 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 ZCCHC9Q8N567 271 aaKnown RBP19.17■□□□□ 0.66
DDX39A-214ENST00000590556 NCDNQ9UBB6 729 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 SPO11Q9Y5K1 396 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 VPS13AQ96RL7 3174 aa19.17■□□□□ 0.66
DDX39A-214ENST00000590556 PLXNA2O75051 1894 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 GOLGA8CPA6NN73 597 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 BCAT2O15382 392 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 HNRNPA2B1P22626 353 aaKnown RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 MPLP40238 635 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 STC1P52823 247 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 RACK1P63244 317 aaKnown RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 PTSQ03393 145 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 C2orf54Q08AI8 447 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 CDKN3Q16667 212 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 PEAR1Q5VY43 1037 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 DENND5AQ6IQ26 1287 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 SYDE1Q6ZW31 735 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 LYSMD3Q7Z3D4 306 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 HSD11B1LQ7Z5J1 315 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 RABEPKQ7Z6M1 372 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 CBARPQ8N350 705 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 C1orf216Q8TAB5 229 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 CCHCR1Q8TD31 782 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 BLOC1S5Q8TDH9 187 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 COQ10AQ96MF6 247 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 SLC6A18Q96N87 628 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 LENG8Q96PV6 779 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 MYOCQ99972 504 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 GPR63Q9BZJ6 419 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 ZFYVE1Q9HBF4 777 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 ARNT2Q9HBZ2 717 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 TM9SF3Q9HD45 589 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 FZD3Q9NPG1 666 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 EIF2B3Q9NR50 452 aaKnown RBP19.16■□□□□ 0.66
DDX39A-214ENST00000590556 AASDHPPTQ9NRN7 309 aa19.16■□□□□ 0.66
DDX39A-214ENST00000590556 HACD3Q9P035 362 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms