RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 MAP7Q14244 749 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 WSCD2Q2TBF2 565 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TCP11X2Q5H9J9 407 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 CRB2Q5IJ48 1285 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TTC39BQ5VTQ0 682 aaPredicted RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 PMF1Q6P1K2 205 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TAF8Q7Z7C8 310 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 ESX1Q8N693 406 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TMEM174Q8WUU8 243 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 SEMA4DQ92854 862 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PNPLA2Q96AD5 504 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 EEF2KMTQ96G04 330 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 FAM81BQ96LP2 452 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 MDFIQ99750 246 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TUBGCP2Q9BSJ2 902 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 REPIN1Q9BWE0 567 aaKnown RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 TWSG1Q9GZX9 223 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TMEM168Q9H0V1 697 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TRIT1Q9H3H1 467 aaKnown RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 DPEP2Q9H4A9 486 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 MMRN2Q9H8L6 949 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 SLAMF7Q9NQ25 335 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 FBXO8Q9NRD0 319 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 FANCLQ9NW38 375 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PDP2Q9P2J9 529 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 NTNG1Q9Y2I2 539 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PCDHB3Q9Y5E6 796 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 MYO7BQ6PIF6 2116 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 A0A0D9SEW6 157 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 A6NCN8 305 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ZSCAN5CA6NGD5 496 aaPredicted RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 RHPN2P1A8MT19 583 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 KCNU1A8MYU2 1149 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 NEMP1O14524 444 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 PPM1DO15297 605 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 P4HA2O15460 535 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 NADKO95544 446 aaPredicted RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 ECEL1O95672 775 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 APOEP02649 317 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 FGF1P05230 155 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 SNRPB2P08579 225 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 TRIM49P0CI25 452 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 TRIM49CP0CI26 452 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 SETSIPP0DME0 302 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 TIMP2P16035 220 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 VARSP26640 1264 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 CLCN6P51797 869 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 PMS1P54277 932 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 MARSP56192 900 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 HDAC4P56524 1084 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 UBASH3AP57075 661 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 YWHAEP62258 255 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 LAMB3Q13751 1172 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 CACNA1CQ13936 2221 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 INPP5AQ14642 412 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 GSE1Q14687 1217 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 IQCB1Q15051 598 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 TSR1Q2NL82 804 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 SMTNL2Q2TAL5 461 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 PLEKHN1Q494U1 663 aaPredicted RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 HSP90AA4PQ58FG1 418 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 RABGAP1LQ5R372 815 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ARTNQ5T4W7 220 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 KRT39Q6A163 491 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 CEACAM20Q6UY09 585 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ARHGAP22Q7Z5H3 698 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 CDH24Q86UP0 819 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 NRROSQ86YC3 692 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 IRF2BP1Q8IU81 584 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 DRC7Q8IY82 874 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 CISD2Q8N5K1 135 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 DCAF4L2Q8NA75 395 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 OR6K2Q8NGY2 324 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 SLC35F5Q8WV83 523 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 INPP5DQ92835 1189 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 RAB7BQ96AH8 199 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 IQCDQ96DY2 449 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 WDR92Q96MX6 357 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 RPRD1AQ96P16 312 aaPredicted RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 RUFY1Q96T51 708 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 HEPHQ9BQS7 1158 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ZPBPQ9BS86 351 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 WRAP53Q9BUR4 548 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 APOOQ9BUR5 198 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 TMUB1Q9BVT8 246 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 NUDT9Q9BW91 350 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 MUC3BQ9H195 1237 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ZDHHC6Q9H6R6 413 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 RUBCNLQ9H714 662 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 TMEM8AQ9HCN3 771 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 LATS2Q9NRM7 1088 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 SAMSN1Q9NSI8 373 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
VPS25-204ENST00000589577 COQ6Q9Y2Z9 468 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 PCDHGA6Q9Y5G7 932 aa6.12□□□□□ -1.43
VPS25-204ENST00000589577 ST14Q9Y5Y6 855 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms