RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SPG21Q9NZD8 308 aa15.31■□□□□ 0.04
MBD1-217ENST00000588937 MARCH4Q9P2E8 410 aaPredicted RBP15.31■□□□□ 0.04
MBD1-217ENST00000588937 C2orf81A6NN90 581 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 E9PBE3 544 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 CBX4O00257 560 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 GRID2O43424 1007 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 DCXO43602 365 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 KLHL41O60662 606 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 WISP3O95389 354 aaPredicted RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 MBL2P11226 248 aaPredicted RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 FDXRP22570 491 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 PMLP29590 882 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 GALNT1Q10472 559 aaPredicted RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 KLF10Q13118 480 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 CYTH1Q15438 398 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 PABPC1LQ4VXU2 614 aaKnown RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 AFTPHQ6ULP2 937 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 UBE2Q1Q7Z7E8 422 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.3■□□□□ 0.04
MBD1-217ENST00000588937 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 FBXO27Q8NI29 283 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 CDKN2AIPNLQ96HQ2 116 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 ADGRE3Q9BY15 652 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 ARHGAP26Q9UNA1 814 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 VPS9D1Q9Y2B5 631 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 ATP11BQ9Y2G3 1177 aa15.3■□□□□ 0.04
MBD1-217ENST00000588937 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.3■□□□□ 0.04
MBD1-217ENST00000588937 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 OR51F1A6NGY5 319 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 H0Y3Z8 333 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CCL22O00626 93 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 PFDN6O15212 129 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TSPAN3O60637 253 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 PSMG1O95456 288 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 THRAP10827 490 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 COX4I1P13073 169 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 SGSHP51688 502 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CREMQ03060 361 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TYSND1Q2T9J0 566 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 ACCSLQ4AC99 568 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 GLT6D1Q7Z4J2 308 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 LDB1Q86U70 411 aaPredicted RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 GPR65Q8IYL9 337 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CMTR2Q8IYT2 770 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 CPSF7Q8N684 471 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 HJURPQ8NCD3 748 aaPredicted RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 OR13C4Q8NGS5 318 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 SGF29Q96ES7 293 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 OR52B2Q96RD2 323 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TCF12Q99081 682 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 RTKNQ9BST9 563 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TRMOQ9BU70 441 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TDRD1Q9BXT4 1180 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 SUDS3Q9H7L9 328 aaPredicted RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
MBD1-217ENST00000588937 STK39Q9UEW8 545 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 MCM8Q9UJA3 840 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CRYL1Q9Y2S2 319 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 COL4A6Q14031 1691 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 A8MT66 165 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 H0Y626 953 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 EFCAB14O75071 495 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 SMIM24O75264 130 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 C1RP00736 705 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 TIMP1P01033 207 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 PSMA3P25788 255 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 GCKP35557 465 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 SUOXP51687 545 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 ZNF140P52738 457 aaPredicted RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 STC1P52823 247 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CDKN2DP55273 166 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 SATB1Q01826 763 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 LSM12Q3MHD2 195 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 RALGPS1Q5JS13 557 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 CXorf57Q6NSI4 855 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 C16orf59Q7L2K0 433 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 POU5F2Q8N7G0 328 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 KDM1BQ8NB78 822 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 WDR60Q8WVS4 1066 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 NUF2Q9BZD4 464 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 UNKQ9C0B0 810 aaKnown RBP15.29■□□□□ 0.04
MBD1-217ENST00000588937 RAI2Q9Y5P3 530 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 INSL5Q9Y5Q6 135 aa15.29■□□□□ 0.04
MBD1-217ENST00000588937 RGSL1A5PLK6 1076 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 NEMP1O14524 444 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 ZBTB14O43829 449 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 PPARGP37231 505 aaPredicted RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 RGRP47804 291 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
MBD1-217ENST00000588937 RCN1Q15293 331 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 GPR158Q5T848 1215 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 PHTF2Q8N3S3 785 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 ANKRD49Q8WVL7 239 aa15.28■□□□□ 0.04
MBD1-217ENST00000588937 MOCOSQ96EN8 888 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms