RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HAUS5O94927 633 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 UBOX5O94941 541 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 GLP2RO95838 553 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 GSRP00390 522 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 GOT2P00505 430 aaKnown RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 PRLP01236 227 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 APOA4P06727 396 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CA3P07451 260 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 PDHA1P08559 390 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 HNRNPA1P09651 372 aaKnown RBP eCLIP8.79□□□□□ -1
SMAD4-206ENST00000588860 SLC35E2BP0CK96 405 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 FGF3P11487 239 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 CPA3P15088 417 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 STMN1P16949 149 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 HOXA9P31269 272 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CD70P32970 193 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 ABL2P42684 1182 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SCTRP47872 440 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 LEPRP48357 1165 aaKnown RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 ZNF140P52738 457 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 PGGT1BP53609 377 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 RAB10P61026 200 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 POU4F1Q01851 419 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 ACVR1Q04771 509 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 GPM6BQ13491 265 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SETDB1Q15047 1291 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SHHQ15465 462 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 TAF1AQ15573 450 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 SLC5A9Q2M3M2 681 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SPRED3Q2MJR0 410 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 MPP7Q5T2T1 576 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 RBM20Q5T481 1227 aaKnown RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 RETSATQ6NUM9 610 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CNSTQ6PJW8 725 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 LDB1Q86U70 411 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 CRLF3Q8IUI8 442 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CILP2Q8IUL8 1156 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 C10orf107Q8IVU9 208 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CEP97Q8IW35 865 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 LMNTD2Q8IXW0 634 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CMTM8Q8IZV2 173 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 LEMD2Q8NC56 503 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 OR13C4Q8NGS5 318 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 FIBINQ8TAL6 211 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 ZNF398Q8TD17 642 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 STYXQ8WUJ0 223 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 KCTD4Q8WVF5 259 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SREK1Q8WXA9 508 aaKnown RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 ING5Q8WYH8 240 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 PEX13Q92968 403 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 USP13Q92995 863 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 TSPAN17Q96FV3 270 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 MYO19Q96H55 970 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 TBATAQ96M53 351 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 C7orf26Q96N11 449 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 NDNQ99608 321 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 TMEM120AQ9BXJ8 343 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 TM6SF2Q9BZW4 377 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 SUDS3Q9H7L9 328 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 NMRAL1Q9HBL8 299 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CATSPERZQ9NTU4 200 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 POLR3BQ9NW08 1133 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 MARCH4Q9P2E8 410 aaPredicted RBP8.79□□□□□ -1
SMAD4-206ENST00000588860 MID2Q9UJV3 735 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 DCTN4Q9UJW0 460 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 RIMKLBQ9ULI2 386 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 CLEC4EQ9ULY5 219 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 KIAA1549LQ6ZVL6 1849 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 A0A0G2JND7 137 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 C2orf81A6NN90 581 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 NEDD8-MDP1E9PL57 170 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PER2O15055 1255 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 CD3EAPO15446 510 aaKnown RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 SMAD6O43541 496 aaKnown RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 SNNO75324 88 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 LYPLA1O75608 230 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 DCTN3O75935 186 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 TGDSO95455 350 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 PRAMEF12O95522 483 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 S1PR4O95977 384 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 MT-CO1P00395 513 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 SERPINE1P05121 402 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 MYL2P10916 166 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 COL6A2P12110 1019 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 CEBPBP17676 345 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 LPOP22079 712 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 SLC1A6P48664 564 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 CSRP3P50461 194 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ARFIP2P53365 341 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 EPHB1P54762 984 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 TAS2R39P59534 338 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 AP1S1P61966 158 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 OCRLQ01968 901 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ACTN3Q08043 901 aaPredicted RBP8.78□□□□□ -1
SMAD4-206ENST00000588860 CCDC15Q0P6D6 951 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 USP4Q13107 963 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 CAMK1Q14012 370 aa8.78□□□□□ -1
SMAD4-206ENST00000588860 ZNF460Q14592 562 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms