RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 COL6A6A6NMZ7 2263 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 AHCTF1Q8WYP5 2266 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 A0A1W2PQJ5 194 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 SYCE3A1L190 88 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 CR2P20023 1033 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 FANCCQ00597 558 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 PIGHQ14442 188 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-205ENST00000587774 IGF2-ASQ6U949 168 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 SDR16C5Q8N3Y7 309 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 ATPAF2Q8N5M1 289 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 NIPA2Q8N8Q9 360 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 OR56A4Q8NGH8 313 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 WDR48Q8TAF3 677 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 SPOCK2Q92563 424 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM47-205ENST00000587774 CBX8Q9HC52 389 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 B4GALT6Q9UBX8 382 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 ANAPC7Q9UJX3 599 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 GPR34Q9UPC5 381 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 PCDHGC4Q9Y5F7 938 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 DGKBQ9Y6T7 804 aa18.84■□□□□ 0.61
TRIM47-205ENST00000587774 BOD1L1Q8NFC6 3051 aa18.83■□□□□ 0.61
TRIM47-205ENST00000587774 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 CACNB4O00305 520 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 NTN3O00634 580 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 HTRA2O43464 458 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 MAFKO60675 156 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 SOCS5O75159 536 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 CPP00450 1065 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 TNFP01375 233 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 CXADRP78310 365 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 ACOX1Q15067 660 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 CNGA3Q16281 694 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 BOLA3Q53S33 107 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 PDCD6IPQ8WUM4 868 aaKnown RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 TEKT4Q8WW24 435 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 KCNE4Q8WWG9 221 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 PRR11Q96HE9 360 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 MGME1Q9BQP7 344 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 LGR4Q9BXB1 951 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 PCDH18Q9HCL0 1135 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 PCDHGA8Q9Y5G5 932 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 BZW2Q9Y6E2 419 aaKnown RBP18.83■□□□□ 0.6
TRIM47-205ENST00000587774 SDK2Q58EX2 2172 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 PIEZO2Q9H5I5 2752 aa18.83■□□□□ 0.6
TRIM47-205ENST00000587774 A0A087X0T9 212 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 EIF4E1BA6NMX2 242 aaKnown RBP18.82■□□□□ 0.6
TRIM47-205ENST00000587774 SERPING1P05155 500 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 FAM228BP0C875 321 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 SERPINB6P35237 376 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 TRIM23P36406 574 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 HSPA9P38646 679 aaKnown RBP18.82■□□□□ 0.6
TRIM47-205ENST00000587774 MAXP61244 160 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 TRAF2Q12933 501 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 FOXR1Q6PIV2 292 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 GPR155Q7Z3F1 870 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 SYN2Q92777 582 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-205ENST00000587774 NUS1Q96E22 293 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 COQ10AQ96MF6 247 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 SLC46A1Q96NT5 459 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 NUP85Q9BW27 656 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 WDR26Q9H7D7 661 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 NOD2Q9HC29 1040 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 IP6K2Q9UHH9 426 aa18.82■□□□□ 0.6
TRIM47-205ENST00000587774 D6RAR5 112 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 ATXN7O15265 892 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-205ENST00000587774 PRB1P04280 392 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 LHCGRP22888 699 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 KELP23276 732 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
TRIM47-205ENST00000587774 VIPR1P32241 457 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 UBASH3AP57075 661 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 TMPRSS3P57727 454 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 TPM4P67936 248 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 PNCKQ6P2M8 343 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 B3GNT8Q7Z7M8 397 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 SFTPA2Q8IWL1 248 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 GPR156Q8NFN8 814 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 WDR36Q8NI36 951 aaKnown RBP18.81■□□□□ 0.6
TRIM47-205ENST00000587774 CPLX3Q8WVH0 158 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 TMEM168Q9H0V1 697 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 CPNE5Q9HCH3 593 aa18.81■□□□□ 0.6
TRIM47-205ENST00000587774 CCDC187A0A096LP49 1063 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 TEX51A0A1B0GUA7 166 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 A0A1W2PQ67 120 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 A0A1W2PQM1 296 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 NPIPB15A6NHN6 443 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-205ENST00000587774 CDRT15L2A8MXV6 281 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 KLK10O43240 276 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 HEXIM1O94992 359 aaKnown RBP18.8■□□□□ 0.6
TRIM47-205ENST00000587774 CYP1A2P05177 515 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 RPLP0P05388 317 aaKnown RBP18.8■□□□□ 0.6
TRIM47-205ENST00000587774 HOXC4P09017 264 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-205ENST00000587774 CD48P09326 243 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 MYCLP1P12525 358 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-205ENST00000587774 MMP13P45452 471 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 CDH6P55285 790 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 CCL7P80098 99 aa18.8■□□□□ 0.6
TRIM47-205ENST00000587774 SKOR1P84550 965 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms