RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CCDC81Q6ZN84 652 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 PRICKLE2Q7Z3G6 844 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 PEX26Q7Z412 305 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 CLEC14AQ86T13 490 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 DCP2Q8IU60 420 aaKnown RBP15.82■□□□□ 0.12
NCLN-203ENST00000587740 ARHGAP12Q8IWW6 846 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 KATNAL2Q8IYT4 538 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 RCOR2Q8IZ40 523 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 NPWQ8N729 165 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.82■□□□□ 0.12
NCLN-203ENST00000587740 GRAMD1AQ96CP6 724 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 FAF2Q96CS3 445 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 RBM41Q96IZ5 413 aaKnown RBP15.82■□□□□ 0.12
NCLN-203ENST00000587740 CCDC114Q96M63 670 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 HDAC8Q9BY41 377 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 SLC17A9Q9BYT1 436 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 TRIM4Q9C037 500 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
NCLN-203ENST00000587740 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 CSNK1G3Q9Y6M4 447 aa15.82■□□□□ 0.12
NCLN-203ENST00000587740 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 C3orf70A6NLC5 250 aaPredicted RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 SPINT1O43278 529 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 ZRANB2O95218 330 aaKnown RBP eCLIP15.81■□□□□ 0.12
NCLN-203ENST00000587740 PAK4O96013 591 aaPredicted RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 CTNNA2P26232 953 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 CSRP3P50461 194 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 NFATC3Q12968 1075 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 PAFAH1B3Q15102 231 aaKnown RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 DEFB133Q30KQ1 61 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 NCBP2-AS2Q69YL0 99 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 FOXR1Q6PIV2 292 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 MFSD7Q6UXD7 560 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 KYAT3Q6YP21 454 aaKnown RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 RBM44Q6ZP01 1051 aaKnown RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 NT5DC3Q86UY8 548 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 RFX6Q8HWS3 928 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 CCDC50Q8IVM0 306 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 NETO2Q8NC67 525 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 GRIN3AQ8TCU5 1115 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 CASKIN2Q8WXE0 1202 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 KRT35Q92764 455 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 CCDC97Q96F63 343 aaPredicted RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 KLF6Q99612 283 aaPredicted RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 CEP44Q9C0F1 390 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 TNKS2Q9H2K2 1166 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 SP110Q9HB58 689 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 EVA1BQ9NVM1 165 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 UBA2Q9UBT2 640 aaPredicted RBP15.81■□□□□ 0.12
NCLN-203ENST00000587740 CAPN6Q9Y6Q1 641 aa15.81■□□□□ 0.12
NCLN-203ENST00000587740 J3KR12 359 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 AQP9O43315 295 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 PRAMEF11O60813 436 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 ZNF821O75541 412 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 LEFTY1O75610 366 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 TNFSF15O95150 251 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 FTCDO95954 541 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 CD160O95971 181 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 PRNPP04156 253 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 ZFXP17010 805 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 RECQLP46063 649 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 MARCKSL1P49006 195 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 DNA2P51530 1060 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 RWDD2BP57060 319 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 SRSF1Q07955 248 aaKnown RBP eCLIP15.8■□□□□ 0.125e-9■□□□□ 8.5
NCLN-203ENST00000587740 CCDC15Q0P6D6 951 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 EIF2B5Q13144 721 aaKnown RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 INO80DQ53TQ3 878 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 C22orf39Q6P5X5 142 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 LEKR1Q6ZMV7 388 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 SPOCD1Q6ZMY3 1216 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 DPY19L3Q6ZPD9 716 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 PARGQ86W56 976 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 PCDH20Q8N6Y1 951 aaKnown RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 PQLC3Q8N755 202 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 UBL4BQ8N7F7 174 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 EXD1Q8NHP7 514 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 FAM174AQ8TBP5 190 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 ALS2CR12Q96Q35 445 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 TCEAL2Q9H3H9 227 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 DYRK4Q9NR20 520 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 IL17BQ9UHF5 180 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 IPO11Q9UI26 975 aaKnown RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 PNMA8BQ9ULN7 279 aaPredicted RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 FCF1Q9Y324 198 aaKnown RBP15.8■□□□□ 0.12
NCLN-203ENST00000587740 ACTL7AQ9Y615 435 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 WASF2Q9Y6W5 498 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 FLNCQ14315 2725 aa15.8■□□□□ 0.12
NCLN-203ENST00000587740 MIF4GDA9UHW6 222 aaKnown RBP15.79■□□□□ 0.12
NCLN-203ENST00000587740 APOL1O14791 398 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 MUSKO15146 869 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 MFSD11O43934 449 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 GCATO75600 419 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 TCEA3O75764 348 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 TMCC1O94876 653 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 JUNDP17535 347 aa15.79■□□□□ 0.12
NCLN-203ENST00000587740 CETN2P41208 172 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms