RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMEM159Q96B96 161 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 CELF6Q96J87 481 aaKnown RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 TUBGCP5Q96RT8 1024 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 CMKLR1Q99788 373 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 NCAPGQ9BPX3 1015 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 ARHGAP9Q9BRR9 750 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 CYP4F12Q9HCS2 524 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 GPATCH2LQ9NWQ4 482 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 GEMIN8Q9NWZ8 242 aaKnown RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 PRSS38A1L453 326 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CFAP69A5D8W1 941 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SIGLEC16A6NMB1 481 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CACNB4O00305 520 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-225ENST00000586385 FGF1P05230 155 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 FGF3P11487 239 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CD1CP29017 333 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CSNK1DP48730 415 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 PAPOLAP51003 745 aaKnown RBP11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF143P52747 638 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-225ENST00000586385 POLR2FP61218 127 aaKnown RBP11.92□□□□□ -0.5
BRCA1-225ENST00000586385 NR1D2Q14995 579 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CA9Q16790 459 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 PNCKQ6P2M8 343 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SCYL2Q6P3W7 929 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 DPPA4Q7L190 304 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ARHGAP12Q8IWW6 846 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 TP53INP2Q8IXH6 220 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ARFGAP1Q8N6T3 406 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 GPBAR1Q8TDU6 330 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 PATE1Q8WXA2 126 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 NKD1Q969G9 470 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 B3GNT4Q9C0J1 378 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SLC39A8Q9C0K1 460 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 DPEP2Q9H4A9 486 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 NLRC4Q9NPP4 1024 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 ADAM22Q9P0K1 906 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
BRCA1-225ENST00000586385 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 IGHV5-10-1A0A0J9YXX1 117 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 A8MX80 341 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 PES1O00541 588 aaKnown RBP11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CPNE6O95741 557 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CEACAM5P06731 702 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CCNB1P14635 433 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 AK4P27144 223 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CD82P27701 267 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CSF2RBP32927 897 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 UBE2HP62256 183 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 TLE1Q04724 770 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 GRM3Q14832 879 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 AMZ1Q400G9 498 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 MAP9Q49MG5 647 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CBARPQ8N350 705 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-225ENST00000586385 NPWQ8N729 165 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 SELENOOQ9BVL4 669 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 SLC25A18Q9H1K4 315 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 VPS16Q9H269 839 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CLSTN2Q9H4D0 955 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 WDR26Q9H7D7 661 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 FAM207AQ9NSI2 230 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-225ENST00000586385 B4GALT6Q9UBX8 382 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 DOPEY2Q9Y3R5 2298 aa11.91□□□□□ -0.5
BRCA1-225ENST00000586385 ANKRD36A6QL64 1941 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 TTC24A2A3L6 582 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PPFIA2O75334 1257 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 ECEL1O95672 775 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 ELFN1P0C7U0 828 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 SFTPCP11686 197 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 LIFP15018 202 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 ALDH4A1P30038 563 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 STAT1P42224 750 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 NSFP46459 744 aaKnown RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 NDST2P52849 883 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 BECN1Q14457 450 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PTPRRQ15256 657 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 CNGA3Q16281 694 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 CYP4V2Q6ZWL3 525 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PIM3Q86V86 326 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PTRH1Q86Y79 214 aaKnown RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 NAGSQ8N159 534 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 MCEEQ96PE7 176 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 CNPY3Q9BT09 278 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-225ENST00000586385 EPN3Q9H201 632 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 ATP13A3Q9H7F0 1226 aa11.9□□□□□ -0.5
BRCA1-225ENST00000586385 SUDS3Q9H7L9 328 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms