RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	GLB1	P16278	677 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	MIP	P30301	263 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CCKBR	P32239	447 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	HCAR3	P49019	387 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	IL10RB	Q08334	325 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	RFTN1	Q14699	578 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	TGIF1	Q15583	401 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CERCAM	Q5T4B2	595 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PNCK	Q6P2M8	343 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	DPPA4	Q7L190	304 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CCNJL	Q8IV13	435 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CBARP	Q8N350	705 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	TMEM74	Q96NL1	305 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CINP	Q9BW66	212 aa	Predicted RBP	16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CWC15	Q9P013	229 aa	Known RBP	16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	LRIT1	Q9P2V4	623 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	RNF215	Q9Y6U7	377 aa		16.42	■□□□□ 0.22
PRKAR1A-206	ENST00000585460		B8ZZF3	427 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460		J3QKU1	62 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	FTL	P02792	175 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	FUCA1	P04066	466 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	ELFN1	P0C7U0	828 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PNLIP	P16233	465 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	SLC10A7	Q0GE19	358 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	HLTF	Q14527	1009 aa	Known RBP eCLIP	16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	STX1A	Q16623	288 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PPP6R3	Q5H9R7	873 aa	Predicted RBP	16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PPP1R2P3	Q6NXS1	205 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	JAML	Q86YT9	394 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PSTK	Q8IV42	348 aa	Known RBP	16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	MED8	Q96G25	268 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	COQ10A	Q96MF6	247 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PSKH2	Q96QS6	385 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	SP110	Q9HB58	689 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	CYP4F12	Q9HCS2	524 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	ACSL6	Q9UKU0	697 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	MYO6	Q9UM54	1294 aa		16.41	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	AGRP	O00253	132 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	NVL	O15381	856 aa	Known RBP	16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	HTRA2	O43464	458 aa	Predicted RBP	16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	B4GAT1	O43505	415 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PRPSAP2	O60256	369 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	RNF8	O76064	485 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	KRT10	P13645	584 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	KEL	P23276	732 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	RENBP	P51606	427 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	B4GALNT1	Q00973	533 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	DPYS	Q14117	519 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	LBR	Q14739	615 aa	Known RBP	16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	ACOX1	Q15067	660 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	C14orf28	Q4W4Y0	310 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	ZNF571	Q7Z3V5	609 aa	Predicted RBP	16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	TMPRSS9	Q7Z410	1059 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PAF1	Q8N7H5	531 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	FNIP1	Q8TF40	1166 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	SPOCK2	Q92563	424 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	DPEP2	Q9H4A9	486 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	HAUS4	Q9H6D7	363 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	SPATS2L	Q9NUQ6	558 aa	Known RBP	16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	WDR70	Q9NW82	654 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	B4GALT6	Q9UBX8	382 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PISD	Q9UG56	409 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	SEPT3	Q9UH03	358 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	LOXL2	Q9Y4K0	774 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	PCDHGC4	Q9Y5F7	938 aa		16.4	■□□□□ 0.22
PRKAR1A-206	ENST00000585460	DDX3X	O00571	662 aa	Known RBP eCLIP	16.39	■□□□□ 0.21	1e-17	■■■■□ 19.9
PRKAR1A-206	ENST00000585460	LRCH4	O75427	683 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	PEX11B	O96011	259 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	FGF1	P05230	155 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	GZMA	P12544	262 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	AP1S1	P61966	158 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	SRSF6	Q13247	344 aa	Known RBP	16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	ARHGEF7	Q14155	803 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	SPECC1L	Q69YQ0	1117 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	SPRED1	Q7Z699	444 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	NRROS	Q86YC3	692 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	PGBD5	Q8N414	524 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	LZTR1	Q8N653	840 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	EXD3	Q8N9H8	876 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	GPBAR1	Q8TDU6	330 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	ZNF599	Q96NL3	588 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	WDR26	Q9H7D7	661 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	RTN4	Q9NQC3	1192 aa	Known RBP	16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	AIPL1	Q9NZN9	384 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	CNOT8	Q9UFF9	292 aa	Known RBP	16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	MOSPD1	Q9UJG1	213 aa		16.39	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	ASH1L	Q9NR48	2969 aa	Known RBP	16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	PRSS38	A1L453	326 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	LRRC53	A6NM62	1247 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460		B4DGG1	531 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	PDE2A	O00408	941 aa	Predicted RBP	16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	NUDT21	O43809	227 aa	Known RBP	16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	CEACAM5	P06731	702 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	JMJD7	P0C870	316 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	ITIH1	P19827	911 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	CR2	P20023	1033 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	AMPD1	P23109	780 aa		16.38	■□□□□ 0.21
PRKAR1A-206	ENST00000585460	IL1R2	P27930	398 aa		16.38	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms