RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LHCGRP22888 699 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 CD86P42081 329 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 GRK6P43250 576 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 SEMG2Q02383 582 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 FZD2Q14332 565 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 IRF4Q15306 451 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 CNGA3Q16281 694 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 USP45Q70EL2 814 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
ERBB2-222ENST00000584908 RAVER1Q8IY67 606 aaKnown RBP16.3■□□□□ 0.2
ERBB2-222ENST00000584908 NDUFAF2Q8N183 169 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 PAF1Q8N7H5 531 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 CAMK1GQ96NX5 476 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 LYSMD1Q96S90 227 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 PCDH9Q9HC56 1237 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 PACSIN2Q9UNF0 486 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-222ENST00000584908 CEP295Q9C0D2 2601 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 MED19A0JLT2 244 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-222ENST00000584908 LZTS3O60299 673 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-222ENST00000584908 TJP3O95049 919 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 ADRB1P08588 477 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 MTM1Q13496 603 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 INAVAQ3KP66 663 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 TPRG1LQ5T0D9 272 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 N4BP2L1Q5TBK1 243 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-222ENST00000584908 AADACL2Q6P093 401 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 B4GALNT4Q76KP1 1039 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 PARGQ86W56 976 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 ACTL9Q8TC94 416 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 AGAP3Q96P47 875 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 TRIB3Q96RU7 358 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 CEP41Q9BYV8 373 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 GLOD4Q9HC38 313 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 CHKBQ9Y259 395 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 BTBD3Q9Y2F9 522 aa16.29■□□□□ 0.2
ERBB2-222ENST00000584908 CAPN8A6NHC0 703 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 CSF2P04141 144 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 NME1P15531 152 aaKnown RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 ZNF30P17039 623 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 CD68P34810 354 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 HNF1BP35680 557 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 TRIM23P36406 574 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 IL9RQ01113 521 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 BNIP3Q12983 259 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 KLF1Q13351 362 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 PDE1CQ14123 709 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 PTK2BQ14289 1009 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 ESRP1Q6NXG1 681 aaKnown RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 MACC1Q6ZN28 852 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 RHBDD1Q8TEB9 315 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 SETD7Q8WTS6 366 aaKnown RBP16.28■□□□□ 0.2
ERBB2-222ENST00000584908 CDC6Q99741 560 aa16.28■□□□□ 0.2
ERBB2-222ENST00000584908 A8MX80 341 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ANKRD66B4E2M5 251 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ZNF189O75820 626 aaPredicted RBP16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ITGAVP06756 1048 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 HOXC4P09017 264 aaPredicted RBP16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ALPIP09923 528 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 EPHB1P54762 984 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 INPP5AQ14642 412 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 PTPRRQ15256 657 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 MEI1Q5TIA1 1274 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 CCDC181Q5TID7 509 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 CRTC1Q6UUV9 634 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 KDM7AQ6ZMT4 941 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 TECPR1Q7Z6L1 1165 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 TSPAN33Q86UF1 283 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ZNF567Q8N184 647 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 DTD2Q96FN9 168 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.2
ERBB2-222ENST00000584908 ADGRE3Q9BY15 652 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 TRHDEQ9UKU6 1024 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
ERBB2-222ENST00000584908 PIAS2O75928 621 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 RBP3P10745 1247 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 CTPS1P17812 591 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 DGKAP23743 735 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 TEAD1P28347 426 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 RBL1P28749 1068 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 THOP1P52888 689 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 HNRNPKP61978 463 aaKnown RBP eCLIP16.26■□□□□ 0.19
ERBB2-222ENST00000584908 PTSQ03393 145 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 DPTQ07507 201 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 EIF2B5Q13144 721 aaKnown RBP16.26■□□□□ 0.19
ERBB2-222ENST00000584908 ZNF211Q13398 564 aaPredicted RBP16.26■□□□□ 0.19
ERBB2-222ENST00000584908 ARHGEF7Q14155 803 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 ACOX1Q15067 660 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 CDKN3Q16667 212 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 QPCTQ16769 361 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 LRRC66Q68CR7 880 aa16.26■□□□□ 0.19
ERBB2-222ENST00000584908 HSD11B1LQ7Z5J1 315 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms